Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vmn1r223Q5SSA0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r223Q5SSA0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r223Q5SSA0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r223Q5SSA0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r223Q5SSA0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r223Q5SSA0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vmn1r223Q5SSA0 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vmn1r223Q5SSA0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vmn1r223Q5SSA0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vmn1r223Q5SSA0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Vmn1r223Q5SSA0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vmn1r223Q5SSA0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vmn1r223Q5SSA0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Gm15546-201ENSMUST00000122095 826 ntBASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vmn1r223Q5SSA0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r223Q5SSA0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r223Q5SSA0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r223Q5SSA0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r223Q5SSA0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r223Q5SSA0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vmn1r223Q5SSA0 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.62■□□□□ 0.41
Vmn1r223Q5SSA0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vmn1r223Q5SSA0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Vmn1r223Q5SSA0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vmn1r223Q5SSA0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vmn1r223Q5SSA0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vmn1r223Q5SSA0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.58■□□□□ 0.41
Vmn1r223Q5SSA0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Vmn1r223Q5SSA0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vmn1r223Q5SSA0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r223Q5SSA0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r223Q5SSA0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.57■□□□□ 0.4
Vmn1r223Q5SSA0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r223Q5SSA0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r223Q5SSA0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r223Q5SSA0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vmn1r223Q5SSA0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vmn1r223Q5SSA0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms