Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.31■■□□□ 1
Gm29609Q3UU56 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm29609Q3UU56 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.31■■□□□ 1
Gm29609Q3UU56 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Gm29609Q3UU56 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm29609Q3UU56 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.31■■□□□ 1
Gm29609Q3UU56 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.31■■□□□ 1
Gm29609Q3UU56 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Gm29609Q3UU56 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.31■■□□□ 1
Gm29609Q3UU56 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm29609Q3UU56 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm29609Q3UU56 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm29609Q3UU56 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.31■■□□□ 1
Gm29609Q3UU56 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm29609Q3UU56 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.31■■□□□ 1
Gm29609Q3UU56 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.3■■□□□ 1
Gm29609Q3UU56 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm29609Q3UU56 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.3■■□□□ 1
Gm29609Q3UU56 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm29609Q3UU56 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.3■■□□□ 1
Gm29609Q3UU56 Gm6139-201ENSMUST00000079261 882 ntBASIC21.3■■□□□ 1
Gm29609Q3UU56 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm29609Q3UU56 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm29609Q3UU56 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm29609Q3UU56 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm29609Q3UU56 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Gm29609Q3UU56 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm29609Q3UU56 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
Gm29609Q3UU56 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Gm29609Q3UU56 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
Gm29609Q3UU56 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Gm29609Q3UU56 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm29609Q3UU56 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm29609Q3UU56 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gm29609Q3UU56 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm29609Q3UU56 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm29609Q3UU56 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm29609Q3UU56 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm29609Q3UU56 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Gm29609Q3UU56 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.27■■□□□ 1
Gm29609Q3UU56 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm29609Q3UU56 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.27■■□□□ 1
Gm29609Q3UU56 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm29609Q3UU56 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.27■■□□□ 1
Gm29609Q3UU56 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.27■■□□□ 1
Gm29609Q3UU56 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.27■■□□□ 1
Gm29609Q3UU56 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.27■■□□□ 1
Gm29609Q3UU56 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
Gm29609Q3UU56 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.27■■□□□ 1
Gm29609Q3UU56 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Gm29609Q3UU56 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gm29609Q3UU56 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm29609Q3UU56 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Gm29609Q3UU56 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm29609Q3UU56 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm29609Q3UU56 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm29609Q3UU56 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Gm26571-201ENSMUST00000181399 666 ntBASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm29609Q3UU56 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm29609Q3UU56 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Gm29609Q3UU56 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.24■□□□□ 0.99
Gm29609Q3UU56 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.24■□□□□ 0.99
Gm29609Q3UU56 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.24■□□□□ 0.99
Gm29609Q3UU56 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm29609Q3UU56 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm29609Q3UU56 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.23■□□□□ 0.99
Gm29609Q3UU56 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 Gm10399-202ENSMUST00000202768 748 ntBASIC21.23■□□□□ 0.99
Gm29609Q3UU56 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm29609Q3UU56 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Gm43017-201ENSMUST00000198296 752 ntBASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Gm29609Q3UU56 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm29609Q3UU56 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Gm29609Q3UU56 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.21■□□□□ 0.99
Gm29609Q3UU56 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms