Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cks1brtQ3UNC9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cks1brtQ3UNC9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cks1brtQ3UNC9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.67□□□□□ -0.06
Cks1brtQ3UNC9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1brtQ3UNC9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1brtQ3UNC9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1brtQ3UNC9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1brtQ3UNC9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1brtQ3UNC9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cks1brtQ3UNC9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cks1brtQ3UNC9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cks1brtQ3UNC9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cks1brtQ3UNC9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cks1brtQ3UNC9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cks1brtQ3UNC9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1brtQ3UNC9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1brtQ3UNC9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1brtQ3UNC9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Cks1brtQ3UNC9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
Cks1brtQ3UNC9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cks1brtQ3UNC9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.62□□□□□ -0.07
Cks1brtQ3UNC9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.62□□□□□ -0.07
Cks1brtQ3UNC9 Zfp131-205ENSMUST00000223812 663 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms