Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.2■□□□□ 0.66
Spg11Q3UHA3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.2■□□□□ 0.66
Spg11Q3UHA3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Spg11Q3UHA3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.2■□□□□ 0.66
Spg11Q3UHA3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Spg11Q3UHA3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Spg11Q3UHA3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Spg11Q3UHA3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Spg11Q3UHA3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Spg11Q3UHA3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Spg11Q3UHA3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Spg11Q3UHA3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.17■□□□□ 0.66
Spg11Q3UHA3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.17■□□□□ 0.66
Spg11Q3UHA3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Spg11Q3UHA3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Spg11Q3UHA3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Spg11Q3UHA3 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Spg11Q3UHA3 Gm5408-201ENSMUST00000197998 747 ntBASIC19.16■□□□□ 0.66
Spg11Q3UHA3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Spg11Q3UHA3 Gm9988-201ENSMUST00000069786 435 ntBASIC19.15■□□□□ 0.66
Spg11Q3UHA3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Spg11Q3UHA3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Spg11Q3UHA3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Spg11Q3UHA3 Trmt13-210ENSMUST00000198454 880 ntBASIC19.15■□□□□ 0.66
Spg11Q3UHA3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.15■□□□□ 0.66
Spg11Q3UHA3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Spg11Q3UHA3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Spg11Q3UHA3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Spg11Q3UHA3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.14■□□□□ 0.65
Spg11Q3UHA3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.14■□□□□ 0.65
Spg11Q3UHA3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Spg11Q3UHA3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Spg11Q3UHA3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Spg11Q3UHA3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Spg11Q3UHA3 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.12■□□□□ 0.65
Spg11Q3UHA3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.12■□□□□ 0.65
Spg11Q3UHA3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.12■□□□□ 0.65
Spg11Q3UHA3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Spg11Q3UHA3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Spg11Q3UHA3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Spg11Q3UHA3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Spg11Q3UHA3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Spg11Q3UHA3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Spg11Q3UHA3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Spg11Q3UHA3 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.1■□□□□ 0.65
Spg11Q3UHA3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Spg11Q3UHA3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Spg11Q3UHA3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Spg11Q3UHA3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Spg11Q3UHA3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Spg11Q3UHA3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.09■□□□□ 0.65
Spg11Q3UHA3 Gm15565-201ENSMUST00000118890 427 ntBASIC19.09■□□□□ 0.65
Spg11Q3UHA3 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Spg11Q3UHA3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Spg11Q3UHA3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Spg11Q3UHA3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Spg11Q3UHA3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.08■□□□□ 0.64
Spg11Q3UHA3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Spg11Q3UHA3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Spg11Q3UHA3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Spg11Q3UHA3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Spg11Q3UHA3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Spg11Q3UHA3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.07■□□□□ 0.64
Spg11Q3UHA3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.07■□□□□ 0.64
Spg11Q3UHA3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Spg11Q3UHA3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.07■□□□□ 0.64
Spg11Q3UHA3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Spg11Q3UHA3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms