Protein–RNA interactions for Protein: Q3UGP9

Lrrc58, Leucine-rich repeat-containing protein 58, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc58Q3UGP9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Lrrc58Q3UGP9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Lrrc58Q3UGP9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Gm15039-201ENSMUST00000118914 875 ntBASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lrrc58Q3UGP9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Lrrc58Q3UGP9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lrrc58Q3UGP9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Lrrc58Q3UGP9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc58Q3UGP9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc58Q3UGP9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc58Q3UGP9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lrrc58Q3UGP9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Lrrc58Q3UGP9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Lrrc58Q3UGP9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrc58Q3UGP9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrc58Q3UGP9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.83■□□□□ 0.76
Lrrc58Q3UGP9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lrrc58Q3UGP9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc58Q3UGP9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc58Q3UGP9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc58Q3UGP9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc58Q3UGP9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lrrc58Q3UGP9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lrrc58Q3UGP9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lrrc58Q3UGP9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc58Q3UGP9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc58Q3UGP9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc58Q3UGP9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc58Q3UGP9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Lrrc58Q3UGP9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc58Q3UGP9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lrrc58Q3UGP9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Lrrc58Q3UGP9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lrrc58Q3UGP9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.78■□□□□ 0.76
Lrrc58Q3UGP9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms