Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc4Q3TCX3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Khdc4Q3TCX3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc4Q3TCX3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Khdc4Q3TCX3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.25■□□□□ 0.67
Khdc4Q3TCX3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc4Q3TCX3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc4Q3TCX3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc4Q3TCX3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc4Q3TCX3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc4Q3TCX3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Khdc4Q3TCX3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Gm9870-201ENSMUST00000063874 645 ntBASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc4Q3TCX3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Khdc4Q3TCX3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Khdc4Q3TCX3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc4Q3TCX3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.21■□□□□ 0.67
Khdc4Q3TCX3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc4Q3TCX3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc4Q3TCX3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc4Q3TCX3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc4Q3TCX3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Khdc4Q3TCX3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.19■□□□□ 0.66
Khdc4Q3TCX3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Khdc4Q3TCX3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc4Q3TCX3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.19■□□□□ 0.66
Khdc4Q3TCX3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc4Q3TCX3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc4Q3TCX3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc4Q3TCX3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Khdc4Q3TCX3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc4Q3TCX3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.17■□□□□ 0.66
Khdc4Q3TCX3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc4Q3TCX3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc4Q3TCX3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc4Q3TCX3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Khdc4Q3TCX3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Khdc4Q3TCX3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Khdc4Q3TCX3 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.16■□□□□ 0.66
Khdc4Q3TCX3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.16■□□□□ 0.66
Khdc4Q3TCX3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.16■□□□□ 0.66
Khdc4Q3TCX3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms