Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q3KNL4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q3KNL4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q3KNL4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q3KNL4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q3KNL4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q3KNL4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.91■□□□□ 0.78
Q3KNL4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Q3KNL4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q3KNL4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Q3KNL4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.9■□□□□ 0.78
Q3KNL4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Q3KNL4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q3KNL4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.9■□□□□ 0.78
Q3KNL4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.9■□□□□ 0.78
Q3KNL4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q3KNL4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q3KNL4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q3KNL4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Q3KNL4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q3KNL4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Q3KNL4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Q3KNL4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q3KNL4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.89■□□□□ 0.77
Q3KNL4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q3KNL4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q3KNL4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q3KNL4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Q3KNL4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q3KNL4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Q3KNL4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q3KNL4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Q3KNL4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.87■□□□□ 0.77
Q3KNL4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q3KNL4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q3KNL4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q3KNL4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Q3KNL4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q3KNL4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q3KNL4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Gm5921-201ENSMUST00000075898 882 ntBASIC19.86■□□□□ 0.77
Q3KNL4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.86■□□□□ 0.77
Q3KNL4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.86■□□□□ 0.77
Q3KNL4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q3KNL4 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Q3KNL4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q3KNL4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3KNL4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3KNL4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3KNL4 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.84■□□□□ 0.77
Q3KNL4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3KNL4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3KNL4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Q3KNL4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3KNL4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3KNL4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q3KNL4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Q3KNL4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Q3KNL4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Q3KNL4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Q3KNL4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.83■□□□□ 0.77
Q3KNL4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Gm43566-201ENSMUST00000196851 808 ntBASIC19.83■□□□□ 0.77
Q3KNL4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q3KNL4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Q3KNL4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Q3KNL4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q3KNL4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q3KNL4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Q3KNL4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3KNL4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3KNL4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Q3KNL4 Gm13238-201ENSMUST00000117655 780 ntBASIC19.82■□□□□ 0.76
Q3KNL4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3KNL4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q3KNL4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms