Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nhej1Q3KNJ2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nhej1Q3KNJ2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nhej1Q3KNJ2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nhej1Q3KNJ2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nhej1Q3KNJ2 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.7■■□□□ 1.06
Nhej1Q3KNJ2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nhej1Q3KNJ2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nhej1Q3KNJ2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nhej1Q3KNJ2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nhej1Q3KNJ2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Nhej1Q3KNJ2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nhej1Q3KNJ2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nhej1Q3KNJ2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
Nhej1Q3KNJ2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nhej1Q3KNJ2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nhej1Q3KNJ2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nhej1Q3KNJ2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Nhej1Q3KNJ2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Gm45444-201ENSMUST00000211394 898 ntBASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nhej1Q3KNJ2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nhej1Q3KNJ2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Nhej1Q3KNJ2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nhej1Q3KNJ2 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.62■■□□□ 1.05
Nhej1Q3KNJ2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Nhej1Q3KNJ2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nhej1Q3KNJ2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nhej1Q3KNJ2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.62■■□□□ 1.05
Nhej1Q3KNJ2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nhej1Q3KNJ2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Nhej1Q3KNJ2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nhej1Q3KNJ2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.61■■□□□ 1.05
Nhej1Q3KNJ2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nhej1Q3KNJ2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nhej1Q3KNJ2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nhej1Q3KNJ2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.6■■□□□ 1.05
Nhej1Q3KNJ2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Nhej1Q3KNJ2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nhej1Q3KNJ2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nhej1Q3KNJ2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nhej1Q3KNJ2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nhej1Q3KNJ2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nhej1Q3KNJ2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nhej1Q3KNJ2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nhej1Q3KNJ2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nhej1Q3KNJ2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nhej1Q3KNJ2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nhej1Q3KNJ2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Nhej1Q3KNJ2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms