Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ptchd3Q0EEE2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptchd3Q0EEE2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptchd3Q0EEE2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd3Q0EEE2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd3Q0EEE2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.52■□□□□ 0.72
Ptchd3Q0EEE2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptchd3Q0EEE2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ptchd3Q0EEE2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ptchd3Q0EEE2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ptchd3Q0EEE2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptchd3Q0EEE2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptchd3Q0EEE2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptchd3Q0EEE2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptchd3Q0EEE2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms