Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hoxc4Q08624 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.74
Hoxc4Q08624 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.7■□□□□ 0.74
Hoxc4Q08624 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc4Q08624 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc4Q08624 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc4Q08624 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc4Q08624 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc4Q08624 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hoxc4Q08624 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc4Q08624 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc4Q08624 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxc4Q08624 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc4Q08624 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.69■□□□□ 0.74
Hoxc4Q08624 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Hoxc4Q08624 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc4Q08624 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hoxc4Q08624 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc4Q08624 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxc4Q08624 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc4Q08624 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Hoxc4Q08624 Mir6236-201ENSMUST00000184437 123 ntBASIC19.68■□□□□ 0.74
Hoxc4Q08624 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc4Q08624 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc4Q08624 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxc4Q08624 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc4Q08624 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Hoxc4Q08624 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc4Q08624 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc4Q08624 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc4Q08624 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc4Q08624 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc4Q08624 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hoxc4Q08624 Gm43017-201ENSMUST00000198296 752 ntBASIC19.67■□□□□ 0.74
Hoxc4Q08624 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc4Q08624 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc4Q08624 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.66■□□□□ 0.74
Hoxc4Q08624 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc4Q08624 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc4Q08624 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxc4Q08624 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hoxc4Q08624 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hoxc4Q08624 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc4Q08624 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Hoxc4Q08624 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc4Q08624 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.65■□□□□ 0.74
Hoxc4Q08624 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc4Q08624 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.65■□□□□ 0.74
Hoxc4Q08624 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc4Q08624 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc4Q08624 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc4Q08624 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc4Q08624 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Hoxc4Q08624 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc4Q08624 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Hoxc4Q08624 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.64■□□□□ 0.73
Hoxc4Q08624 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc4Q08624 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc4Q08624 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc4Q08624 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.64■□□□□ 0.73
Hoxc4Q08624 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc4Q08624 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc4Q08624 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc4Q08624 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc4Q08624 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.62■□□□□ 0.73
Hoxc4Q08624 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc4Q08624 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc4Q08624 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc4Q08624 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc4Q08624 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.61■□□□□ 0.73
Hoxc4Q08624 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxc4Q08624 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc4Q08624 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxc4Q08624 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms