Protein–RNA interactions for Protein: Q04742

Emx1, Homeobox protein EMX1, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Emx1Q04742 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Emx1Q04742 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.86■□□□□ 0.61
Emx1Q04742 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.86■□□□□ 0.61
Emx1Q04742 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Emx1Q04742 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Emx1Q04742 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.86■□□□□ 0.61
Emx1Q04742 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Emx1Q04742 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Emx1Q04742 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Emx1Q04742 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.85■□□□□ 0.61
Emx1Q04742 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Emx1Q04742 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Emx1Q04742 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.85■□□□□ 0.61
Emx1Q04742 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.85■□□□□ 0.61
Emx1Q04742 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Emx1Q04742 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.85■□□□□ 0.61
Emx1Q04742 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Emx1Q04742 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Emx1Q04742 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.84■□□□□ 0.61
Emx1Q04742 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Emx1Q04742 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Emx1Q04742 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Emx1Q04742 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Emx1Q04742 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.84■□□□□ 0.61
Emx1Q04742 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Emx1Q04742 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Emx1Q04742 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Emx1Q04742 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Emx1Q04742 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.84■□□□□ 0.61
Emx1Q04742 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.84■□□□□ 0.61
Emx1Q04742 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Emx1Q04742 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Emx1Q04742 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Emx1Q04742 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Emx1Q04742 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Emx1Q04742 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Emx1Q04742 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Emx1Q04742 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Emx1Q04742 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Emx1Q04742 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.83■□□□□ 0.6
Emx1Q04742 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.83■□□□□ 0.6
Emx1Q04742 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Emx1Q04742 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Emx1Q04742 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Emx1Q04742 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Emx1Q04742 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Emx1Q04742 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Emx1Q04742 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Emx1Q04742 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Emx1Q04742 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Emx1Q04742 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.82■□□□□ 0.6
Emx1Q04742 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.82■□□□□ 0.6
Emx1Q04742 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Emx1Q04742 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Emx1Q04742 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Emx1Q04742 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Gm14117-201ENSMUST00000122417 843 ntBASIC18.81■□□□□ 0.6
Emx1Q04742 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.81■□□□□ 0.6
Emx1Q04742 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.81■□□□□ 0.6
Emx1Q04742 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Emx1Q04742 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Emx1Q04742 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Emx1Q04742 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.8■□□□□ 0.6
Emx1Q04742 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Emx1Q04742 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Emx1Q04742 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Emx1Q04742 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Emx1Q04742 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Emx1Q04742 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Emx1Q04742 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Emx1Q04742 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Emx1Q04742 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.8■□□□□ 0.6
Emx1Q04742 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Emx1Q04742 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Emx1Q04742 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Emx1Q04742 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Emx1Q04742 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Emx1Q04742 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Emx1Q04742 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Emx1Q04742 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Emx1Q04742 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Emx1Q04742 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Emx1Q04742 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Emx1Q04742 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Emx1Q04742 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Emx1Q04742 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Emx1Q04742 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Emx1Q04742 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.78■□□□□ 0.6
Emx1Q04742 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Emx1Q04742 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Emx1Q04742 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Emx1Q04742 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms