Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.99■□□□□ 0.95
Vps45P97390 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Vps45P97390 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Vps45P97390 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Vps45P97390 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.98■□□□□ 0.95
Vps45P97390 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.98■□□□□ 0.95
Vps45P97390 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.98■□□□□ 0.95
Vps45P97390 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Vps45P97390 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Vps45P97390 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.97■□□□□ 0.95
Vps45P97390 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Vps45P97390 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Vps45P97390 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Vps45P97390 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Vps45P97390 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vps45P97390 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps45P97390 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps45P97390 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Vps45P97390 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.96■□□□□ 0.95
Vps45P97390 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps45P97390 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Vps45P97390 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps45P97390 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Vps45P97390 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Vps45P97390 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps45P97390 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Vps45P97390 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps45P97390 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps45P97390 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps45P97390 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Vps45P97390 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Vps45P97390 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.94■□□□□ 0.94
Vps45P97390 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Vps45P97390 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Vps45P97390 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.94■□□□□ 0.94
Vps45P97390 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Vps45P97390 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Vps45P97390 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Vps45P97390 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps45P97390 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps45P97390 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps45P97390 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Vps45P97390 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps45P97390 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps45P97390 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps45P97390 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.93■□□□□ 0.94
Vps45P97390 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Vps45P97390 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps45P97390 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps45P97390 Gm18284-201ENSMUST00000172604 624 ntBASIC20.92■□□□□ 0.94
Vps45P97390 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Vps45P97390 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps45P97390 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Vps45P97390 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps45P97390 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps45P97390 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps45P97390 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Vps45P97390 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.92■□□□□ 0.94
Vps45P97390 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps45P97390 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps45P97390 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.91■□□□□ 0.94
Vps45P97390 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.91■□□□□ 0.94
Vps45P97390 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Vps45P97390 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Vps45P97390 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Vps45P97390 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.9■□□□□ 0.94
Vps45P97390 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Vps45P97390 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps45P97390 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms