Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Lsm6P62313 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm6P62313 Gm7417-201ENSMUST00000192950 473 ntBASIC17.83■□□□□ 0.44
Lsm6P62313 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm6P62313 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm6P62313 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm6P62313 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm6P62313 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Lsm6P62313 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lsm6P62313 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.83■□□□□ 0.44
Lsm6P62313 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm6P62313 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.82■□□□□ 0.44
Lsm6P62313 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm6P62313 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm6P62313 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm6P62313 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Lsm6P62313 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm6P62313 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm6P62313 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm6P62313 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lsm6P62313 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Lsm6P62313 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm6P62313 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Lsm6P62313 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm6P62313 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm6P62313 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm6P62313 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lsm6P62313 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.8■□□□□ 0.44
Lsm6P62313 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Lsm6P62313 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Lsm6P62313 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lsm6P62313 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Lsm6P62313 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lsm6P62313 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm6P62313 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.78■□□□□ 0.44
Lsm6P62313 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Lsm6P62313 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.78■□□□□ 0.44
Lsm6P62313 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.78■□□□□ 0.44
Lsm6P62313 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lsm6P62313 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.78■□□□□ 0.44
Lsm6P62313 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm6P62313 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Lsm6P62313 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm6P62313 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm6P62313 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm6P62313 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm6P62313 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm6P62313 Etf1-202ENSMUST00000180351 108 ntBASIC17.77■□□□□ 0.44
Lsm6P62313 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Lsm6P62313 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lsm6P62313 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lsm6P62313 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Lsm6P62313 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm6P62313 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm6P62313 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm6P62313 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lsm6P62313 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.75■□□□□ 0.43
Lsm6P62313 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.75■□□□□ 0.43
Lsm6P62313 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.75■□□□□ 0.43
Lsm6P62313 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lsm6P62313 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.75■□□□□ 0.43
Lsm6P62313 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms