Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Eif3eP60229 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Eif3eP60229 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Eif3eP60229 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Eif3eP60229 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Eif3eP60229 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.97■□□□□ 0.95
Eif3eP60229 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.97■□□□□ 0.95
Eif3eP60229 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Eif3eP60229 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Eif3eP60229 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Eif3eP60229 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Eif3eP60229 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.96■□□□□ 0.95
Eif3eP60229 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Eif3eP60229 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.96■□□□□ 0.95
Eif3eP60229 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Eif3eP60229 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Eif3eP60229 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Eif3eP60229 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Eif3eP60229 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Eif3eP60229 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Eif3eP60229 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Eif3eP60229 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Eif3eP60229 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Eif3eP60229 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Eif3eP60229 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Eif3eP60229 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Eif3eP60229 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.93■□□□□ 0.94
Eif3eP60229 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.93■□□□□ 0.94
Eif3eP60229 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Eif3eP60229 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Eif3eP60229 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Eif3eP60229 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Eif3eP60229 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Eif3eP60229 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.92■□□□□ 0.94
Eif3eP60229 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Eif3eP60229 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.92■□□□□ 0.94
Eif3eP60229 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.92■□□□□ 0.94
Eif3eP60229 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Eif3eP60229 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Eif3eP60229 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Eif3eP60229 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Eif3eP60229 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Eif3eP60229 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Eif3eP60229 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.91■□□□□ 0.94
Eif3eP60229 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.91■□□□□ 0.94
Eif3eP60229 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
Eif3eP60229 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.9■□□□□ 0.94
Eif3eP60229 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.9■□□□□ 0.94
Eif3eP60229 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Eif3eP60229 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Eif3eP60229 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Eif3eP60229 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.89■□□□□ 0.94
Eif3eP60229 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Eif3eP60229 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Eif3eP60229 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Eif3eP60229 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.89■□□□□ 0.93
Eif3eP60229 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.89■□□□□ 0.93
Eif3eP60229 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Eif3eP60229 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
Eif3eP60229 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Eif3eP60229 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Eif3eP60229 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Eif3eP60229 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Eif3eP60229 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Eif3eP60229 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Eif3eP60229 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Eif3eP60229 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Eif3eP60229 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Eif3eP60229 Gm40881-201ENSMUST00000223397 166 ntBASIC20.88■□□□□ 0.93
Eif3eP60229 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms