Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh11P55288 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh11P55288 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh11P55288 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh11P55288 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdh11P55288 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.41■□□□□ 0.54
Cdh11P55288 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh11P55288 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.41■□□□□ 0.54
Cdh11P55288 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdh11P55288 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cdh11P55288 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh11P55288 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdh11P55288 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Cdh11P55288 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdh11P55288 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh11P55288 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh11P55288 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh11P55288 Iqck-206ENSMUST00000208658 2891 ntBASIC18.4■□□□□ 0.54
Cdh11P55288 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdh11P55288 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdh11P55288 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.39■□□□□ 0.53
Cdh11P55288 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh11P55288 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh11P55288 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh11P55288 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.39■□□□□ 0.53
Cdh11P55288 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cdh11P55288 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdh11P55288 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh11P55288 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cdh11P55288 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdh11P55288 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.39■□□□□ 0.53
Cdh11P55288 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cdh11P55288 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdh11P55288 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Cdh11P55288 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cdh11P55288 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdh11P55288 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cdh11P55288 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Cdh11P55288 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Cdh11P55288 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdh11P55288 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdh11P55288 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdh11P55288 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Cdh11P55288 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cdh11P55288 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.36■□□□□ 0.53
Cdh11P55288 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdh11P55288 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh11P55288 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh11P55288 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh11P55288 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh11P55288 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cdh11P55288 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh11P55288 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.35■□□□□ 0.53
Cdh11P55288 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdh11P55288 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.35■□□□□ 0.53
Cdh11P55288 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh11P55288 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cdh11P55288 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdh11P55288 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh11P55288 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.34■□□□□ 0.53
Cdh11P55288 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.34■□□□□ 0.53
Cdh11P55288 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Cdh11P55288 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.34■□□□□ 0.53
Cdh11P55288 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh11P55288 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh11P55288 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh11P55288 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh11P55288 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cdh11P55288 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh11P55288 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms