Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Hmgcs2P54869 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Hmgcs2P54869 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hmgcs2P54869 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Hmgcs2P54869 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Hmgcs2P54869 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Hmgcs2P54869 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Hmgcs2P54869 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.84■■□□□ 1.25
Hmgcs2P54869 Gm42642-201ENSMUST00000200683 355 ntBASIC22.84■■□□□ 1.25
Hmgcs2P54869 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Hmgcs2P54869 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Hmgcs2P54869 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Hmgcs2P54869 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs2P54869 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs2P54869 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Hmgcs2P54869 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.83■■□□□ 1.25
Hmgcs2P54869 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.83■■□□□ 1.25
Hmgcs2P54869 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs2P54869 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.83■■□□□ 1.25
Hmgcs2P54869 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Hmgcs2P54869 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC22.83■■□□□ 1.25
Hmgcs2P54869 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Hmgcs2P54869 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Hmgcs2P54869 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC22.82■■□□□ 1.24
Hmgcs2P54869 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.82■■□□□ 1.24
Hmgcs2P54869 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hmgcs2P54869 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hmgcs2P54869 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.82■■□□□ 1.24
Hmgcs2P54869 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.82■■□□□ 1.24
Hmgcs2P54869 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Hmgcs2P54869 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Hmgcs2P54869 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC22.82■■□□□ 1.24
Hmgcs2P54869 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Gm27405-201ENSMUST00000184201 112 ntBASIC22.81■■□□□ 1.24
Hmgcs2P54869 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs2P54869 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs2P54869 AC165080.2-201ENSMUST00000217491 1530 ntBASIC22.81■■□□□ 1.24
Hmgcs2P54869 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Hmgcs2P54869 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs2P54869 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC22.8■■□□□ 1.24
Hmgcs2P54869 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs2P54869 Gm27045-201ENSMUST00000182145 1402 ntBASIC22.8■■□□□ 1.24
Hmgcs2P54869 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs2P54869 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Hmgcs2P54869 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs2P54869 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs2P54869 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.79■■□□□ 1.24
Hmgcs2P54869 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC22.79■■□□□ 1.24
Hmgcs2P54869 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Hmgcs2P54869 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs2P54869 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs2P54869 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.79■■□□□ 1.24
Hmgcs2P54869 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.79■■□□□ 1.24
Hmgcs2P54869 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs2P54869 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Hmgcs2P54869 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.78■■□□□ 1.24
Hmgcs2P54869 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Hmgcs2P54869 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Hmgcs2P54869 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC22.78■■□□□ 1.24
Hmgcs2P54869 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Hmgcs2P54869 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Hmgcs2P54869 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Hmgcs2P54869 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Hmgcs2P54869 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Hmgcs2P54869 Gm10849-201ENSMUST00000100397 618 ntBASIC22.77■■□□□ 1.24
Hmgcs2P54869 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC22.77■■□□□ 1.24
Hmgcs2P54869 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.77■■□□□ 1.24
Hmgcs2P54869 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Hmgcs2P54869 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Hmgcs2P54869 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.77■■□□□ 1.24
Hmgcs2P54869 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Hmgcs2P54869 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
Hmgcs2P54869 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Hmgcs2P54869 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Hmgcs2P54869 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Hmgcs2P54869 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Hmgcs2P54869 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Hmgcs2P54869 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Hmgcs2P54869 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Hmgcs2P54869 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Hmgcs2P54869 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Hmgcs2P54869 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.74■■□□□ 1.23
Hmgcs2P54869 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms