Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atxn1P54254 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atxn1P54254 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atxn1P54254 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.16■□□□□ 0.82
Atxn1P54254 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Atxn1P54254 Spcs1-204ENSMUST00000226782 949 ntBASIC20.16■□□□□ 0.82
Atxn1P54254 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Atxn1P54254 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atxn1P54254 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Atxn1P54254 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atxn1P54254 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Atxn1P54254 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.16■□□□□ 0.82
Atxn1P54254 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.15■□□□□ 0.82
Atxn1P54254 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Atxn1P54254 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Atxn1P54254 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Atxn1P54254 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.15■□□□□ 0.82
Atxn1P54254 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Atxn1P54254 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.14■□□□□ 0.81
Atxn1P54254 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.14■□□□□ 0.81
Atxn1P54254 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.14■□□□□ 0.81
Atxn1P54254 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Atxn1P54254 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Atxn1P54254 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atxn1P54254 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Atxn1P54254 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.13■□□□□ 0.81
Atxn1P54254 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.13■□□□□ 0.81
Atxn1P54254 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Atxn1P54254 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atxn1P54254 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Atxn1P54254 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Atxn1P54254 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Atxn1P54254 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atxn1P54254 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atxn1P54254 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atxn1P54254 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.12■□□□□ 0.81
Atxn1P54254 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atxn1P54254 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atxn1P54254 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.12■□□□□ 0.81
Atxn1P54254 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atxn1P54254 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Atxn1P54254 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Atxn1P54254 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Atxn1P54254 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Atxn1P54254 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Atxn1P54254 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Atxn1P54254 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Atxn1P54254 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.1■□□□□ 0.81
Atxn1P54254 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Atxn1P54254 Gm18671-201ENSMUST00000214826 683 ntBASIC20.1■□□□□ 0.81
Atxn1P54254 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atxn1P54254 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Atxn1P54254 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Atxn1P54254 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Atxn1P54254 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.09■□□□□ 0.81
Atxn1P54254 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.09■□□□□ 0.81
Atxn1P54254 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.09■□□□□ 0.81
Atxn1P54254 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Atxn1P54254 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Atxn1P54254 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Atxn1P54254 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.08■□□□□ 0.81
Atxn1P54254 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Atxn1P54254 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.08■□□□□ 0.81
Atxn1P54254 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.08■□□□□ 0.81
Atxn1P54254 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.08■□□□□ 0.8
Atxn1P54254 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atxn1P54254 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.07■□□□□ 0.8
Atxn1P54254 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atxn1P54254 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Atxn1P54254 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Atxn1P54254 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.07■□□□□ 0.8
Atxn1P54254 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.07■□□□□ 0.8
Atxn1P54254 Gm40848-201ENSMUST00000221998 324 ntBASIC20.07■□□□□ 0.8
Atxn1P54254 Gm10602-201ENSMUST00000098239 609 ntBASIC20.07■□□□□ 0.8
Atxn1P54254 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Atxn1P54254 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms