Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Pdx1P52946 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdx1P52946 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdx1P52946 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.11■□□□□ 0.81
Pdx1P52946 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdx1P52946 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdx1P52946 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdx1P52946 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdx1P52946 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Pdx1P52946 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pdx1P52946 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
Pdx1P52946 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Pdx1P52946 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.09■□□□□ 0.81
Pdx1P52946 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.09■□□□□ 0.81
Pdx1P52946 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Pdx1P52946 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pdx1P52946 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pdx1P52946 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdx1P52946 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pdx1P52946 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Pdx1P52946 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pdx1P52946 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.08■□□□□ 0.81
Pdx1P52946 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Pdx1P52946 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Pdx1P52946 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.08■□□□□ 0.81
Pdx1P52946 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pdx1P52946 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Pdx1P52946 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdx1P52946 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pdx1P52946 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pdx1P52946 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdx1P52946 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdx1P52946 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pdx1P52946 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.07■□□□□ 0.8
Pdx1P52946 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.07■□□□□ 0.8
Pdx1P52946 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Pdx1P52946 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdx1P52946 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Pdx1P52946 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pdx1P52946 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdx1P52946 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdx1P52946 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pdx1P52946 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Pdx1P52946 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdx1P52946 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.06■□□□□ 0.8
Pdx1P52946 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdx1P52946 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdx1P52946 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pdx1P52946 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdx1P52946 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.06■□□□□ 0.8
Pdx1P52946 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pdx1P52946 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pdx1P52946 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.06■□□□□ 0.8
Pdx1P52946 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pdx1P52946 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdx1P52946 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdx1P52946 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pdx1P52946 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdx1P52946 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdx1P52946 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdx1P52946 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pdx1P52946 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdx1P52946 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdx1P52946 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdx1P52946 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.04■□□□□ 0.8
Pdx1P52946 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.04■□□□□ 0.8
Pdx1P52946 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
Pdx1P52946 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pdx1P52946 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdx1P52946 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdx1P52946 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pdx1P52946 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pdx1P52946 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdx1P52946 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pdx1P52946 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.03■□□□□ 0.8
Pdx1P52946 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdx1P52946 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdx1P52946 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdx1P52946 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pdx1P52946 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms