Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.67■■□□□ 1.22
Nek1P51954 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nek1P51954 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Nek1P51954 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Nek1P51954 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nek1P51954 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
Nek1P51954 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.66■■□□□ 1.22
Nek1P51954 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Nek1P51954 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nek1P51954 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Nek1P51954 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Nek1P51954 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nek1P51954 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nek1P51954 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.65■■□□□ 1.22
Nek1P51954 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.65■■□□□ 1.22
Nek1P51954 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nek1P51954 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.65■■□□□ 1.22
Nek1P51954 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Nek1P51954 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.64■■□□□ 1.21
Nek1P51954 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Nek1P51954 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nek1P51954 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nek1P51954 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nek1P51954 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nek1P51954 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Nek1P51954 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Nek1P51954 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Nek1P51954 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.63■■□□□ 1.21
Nek1P51954 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nek1P51954 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nek1P51954 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nek1P51954 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nek1P51954 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.62■■□□□ 1.21
Nek1P51954 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nek1P51954 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Nek1P51954 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.62■■□□□ 1.21
Nek1P51954 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nek1P51954 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nek1P51954 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Nek1P51954 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nek1P51954 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nek1P51954 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nek1P51954 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Nek1P51954 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.61■■□□□ 1.21
Nek1P51954 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nek1P51954 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nek1P51954 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nek1P51954 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nek1P51954 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Nek1P51954 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.6■■□□□ 1.21
Nek1P51954 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Nek1P51954 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Nek1P51954 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.6■■□□□ 1.21
Nek1P51954 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nek1P51954 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Nek1P51954 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Nek1P51954 Gm10620-201ENSMUST00000098379 1332 ntBASIC22.59■■□□□ 1.21
Nek1P51954 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nek1P51954 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.59■■□□□ 1.21
Nek1P51954 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nek1P51954 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nek1P51954 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nek1P51954 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nek1P51954 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nek1P51954 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nek1P51954 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.58■■□□□ 1.21
Nek1P51954 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nek1P51954 Gm37035-201ENSMUST00000194809 2148 ntBASIC22.58■■□□□ 1.2
Nek1P51954 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nek1P51954 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nek1P51954 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Nek1P51954 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.57■■□□□ 1.2
Nek1P51954 Gm7417-201ENSMUST00000192950 473 ntBASIC22.57■■□□□ 1.2
Nek1P51954 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nek1P51954 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.57■■□□□ 1.2
Nek1P51954 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nek1P51954 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Nek1P51954 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nek1P51954 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nek1P51954 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC22.56■■□□□ 1.2
Nek1P51954 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nek1P51954 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms