Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Gm12922-201ENSMUST00000120626 809 ntBASIC18.37■□□□□ 0.53
Ccr1l1P51676 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ccr1l1P51676 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccr1l1P51676 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccr1l1P51676 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.37■□□□□ 0.53
Ccr1l1P51676 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ccr1l1P51676 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ccr1l1P51676 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccr1l1P51676 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Ccr1l1P51676 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.35■□□□□ 0.53
Ccr1l1P51676 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccr1l1P51676 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.35■□□□□ 0.53
Ccr1l1P51676 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccr1l1P51676 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccr1l1P51676 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccr1l1P51676 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.34■□□□□ 0.53
Ccr1l1P51676 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccr1l1P51676 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccr1l1P51676 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccr1l1P51676 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccr1l1P51676 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccr1l1P51676 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccr1l1P51676 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccr1l1P51676 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr1l1P51676 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.33■□□□□ 0.52
Ccr1l1P51676 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Ccr1l1P51676 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr1l1P51676 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr1l1P51676 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr1l1P51676 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccr1l1P51676 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ccr1l1P51676 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccr1l1P51676 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr1l1P51676 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccr1l1P51676 Gm9847-201ENSMUST00000052528 599 ntBASIC18.31■□□□□ 0.52
Ccr1l1P51676 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccr1l1P51676 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr1l1P51676 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr1l1P51676 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr1l1P51676 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr1l1P51676 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccr1l1P51676 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr1l1P51676 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr1l1P51676 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccr1l1P51676 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr1l1P51676 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccr1l1P51676 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr1l1P51676 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccr1l1P51676 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ccr1l1P51676 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr1l1P51676 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr1l1P51676 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccr1l1P51676 Golgb1-201ENSMUST00000023534 498 ntBASIC18.29■□□□□ 0.52
Ccr1l1P51676 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr1l1P51676 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr1l1P51676 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.29■□□□□ 0.52
Ccr1l1P51676 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccr1l1P51676 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr1l1P51676 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr1l1P51676 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr1l1P51676 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccr1l1P51676 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr1l1P51676 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Ccr1l1P51676 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccr1l1P51676 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ccr1l1P51676 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms