Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Atp6v1aP50516 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Atp6v1aP50516 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Atp6v1aP50516 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Atp6v1aP50516 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Atp6v1aP50516 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Atp6v1aP50516 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Atp6v1aP50516 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Atp6v1aP50516 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Atp6v1aP50516 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Atp6v1aP50516 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Atp6v1aP50516 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Atp6v1aP50516 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.58■■□□□ 1.52
Atp6v1aP50516 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Atp6v1aP50516 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.57■■□□□ 1.52
Atp6v1aP50516 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Atp6v1aP50516 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Atp6v1aP50516 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.56■■□□□ 1.52
Atp6v1aP50516 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Atp6v1aP50516 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.56■■□□□ 1.52
Atp6v1aP50516 Gm18671-201ENSMUST00000214826 683 ntBASIC24.56■■□□□ 1.52
Atp6v1aP50516 AC112142.1-201ENSMUST00000228796 918 ntBASIC24.56■■□□□ 1.52
Atp6v1aP50516 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Atp6v1aP50516 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Atp6v1aP50516 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Atp6v1aP50516 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp6v1aP50516 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC24.55■■□□□ 1.52
Atp6v1aP50516 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Atp6v1aP50516 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp6v1aP50516 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp6v1aP50516 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.55■■□□□ 1.52
Atp6v1aP50516 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp6v1aP50516 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp6v1aP50516 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Atp6v1aP50516 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.54■■□□□ 1.52
Atp6v1aP50516 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Atp6v1aP50516 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Atp6v1aP50516 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Atp6v1aP50516 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Atp6v1aP50516 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Atp6v1aP50516 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Atp6v1aP50516 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Atp6v1aP50516 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC24.52■■□□□ 1.52
Atp6v1aP50516 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Atp6v1aP50516 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Atp6v1aP50516 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Atp6v1aP50516 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Atp6v1aP50516 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.51■■□□□ 1.51
Atp6v1aP50516 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1aP50516 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1aP50516 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1aP50516 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1aP50516 Gm10033-202ENSMUST00000211874 928 ntBASIC24.51■■□□□ 1.51
Atp6v1aP50516 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1aP50516 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.51■■□□□ 1.51
Atp6v1aP50516 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1aP50516 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Atp6v1aP50516 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Atp6v1aP50516 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC24.5■■□□□ 1.51
Atp6v1aP50516 AV356131-201ENSMUST00000206201 750 ntBASIC24.5■■□□□ 1.51
Atp6v1aP50516 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Atp6v1aP50516 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.5■■□□□ 1.51
Atp6v1aP50516 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Atp6v1aP50516 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC24.5■■□□□ 1.51
Atp6v1aP50516 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Atp6v1aP50516 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Atp6v1aP50516 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Atp6v1aP50516 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Atp6v1aP50516 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Atp6v1aP50516 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.48■■□□□ 1.51
Atp6v1aP50516 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atp6v1aP50516 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atp6v1aP50516 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC24.48■■□□□ 1.51
Atp6v1aP50516 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.48■■□□□ 1.51
Atp6v1aP50516 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Atp6v1aP50516 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.48■■□□□ 1.51
Atp6v1aP50516 CT025689.6-201ENSMUST00000224991 1104 ntBASIC24.48■■□□□ 1.51
Atp6v1aP50516 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Atp6v1aP50516 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Atp6v1aP50516 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp6v1aP50516 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp6v1aP50516 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp6v1aP50516 Gm27045-201ENSMUST00000182145 1402 ntBASIC24.47■■□□□ 1.51
Atp6v1aP50516 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp6v1aP50516 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC24.47■■□□□ 1.51
Atp6v1aP50516 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC24.47■■□□□ 1.51
Atp6v1aP50516 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Atp6v1aP50516 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Atp6v1aP50516 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.46■■□□□ 1.51
Atp6v1aP50516 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms