Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf4P47741 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf4P47741 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf4P47741 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Tnfrsf4P47741 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Tnfrsf4P47741 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnfrsf4P47741 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnfrsf4P47741 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 Gm10033-202ENSMUST00000211874 928 ntBASIC20.64■□□□□ 0.89
Tnfrsf4P47741 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.64■□□□□ 0.89
Tnfrsf4P47741 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.63■□□□□ 0.89
Tnfrsf4P47741 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf4P47741 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.63■□□□□ 0.89
Tnfrsf4P47741 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf4P47741 AV356131-201ENSMUST00000206201 750 ntBASIC20.63■□□□□ 0.89
Tnfrsf4P47741 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf4P47741 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf4P47741 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf4P47741 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Tnfrsf4P47741 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.62■□□□□ 0.89
Tnfrsf4P47741 Gm11421-201ENSMUST00000122124 294 ntBASIC20.62■□□□□ 0.89
Tnfrsf4P47741 Gm42778-201ENSMUST00000199644 553 ntBASIC20.62■□□□□ 0.89
Tnfrsf4P47741 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfrsf4P47741 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf4P47741 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf4P47741 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf4P47741 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tnfrsf4P47741 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf4P47741 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf4P47741 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf4P47741 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf4P47741 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf4P47741 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf4P47741 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.59■□□□□ 0.89
Tnfrsf4P47741 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tnfrsf4P47741 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf4P47741 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf4P47741 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.58■□□□□ 0.89
Tnfrsf4P47741 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf4P47741 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.58■□□□□ 0.89
Tnfrsf4P47741 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnfrsf4P47741 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.58■□□□□ 0.88
Tnfrsf4P47741 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf4P47741 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf4P47741 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf4P47741 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnfrsf4P47741 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnfrsf4P47741 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf4P47741 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf4P47741 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf4P47741 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.56■□□□□ 0.88
Tnfrsf4P47741 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.56■□□□□ 0.88
Tnfrsf4P47741 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf4P47741 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnfrsf4P47741 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.56■□□□□ 0.88
Tnfrsf4P47741 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tnfrsf4P47741 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf4P47741 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf4P47741 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf4P47741 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf4P47741 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.54■□□□□ 0.88
Tnfrsf4P47741 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms