Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.21■□□□□ 0.35
Hist1h1dP43277 Gm12366-201ENSMUST00000121722 873 ntBASIC17.21■□□□□ 0.35
Hist1h1dP43277 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.21■□□□□ 0.35
Hist1h1dP43277 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.21■□□□□ 0.35
Hist1h1dP43277 Gm5786-201ENSMUST00000085368 882 ntBASIC17.21■□□□□ 0.35
Hist1h1dP43277 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.21■□□□□ 0.35
Hist1h1dP43277 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1dP43277 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.2■□□□□ 0.34
Hist1h1dP43277 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1dP43277 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.19■□□□□ 0.34
Hist1h1dP43277 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1dP43277 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h1dP43277 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h1dP43277 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hist1h1dP43277 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.17■□□□□ 0.34
Hist1h1dP43277 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hist1h1dP43277 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hist1h1dP43277 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h1dP43277 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Hist1h1dP43277 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1dP43277 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.15■□□□□ 0.34
Hist1h1dP43277 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1dP43277 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.15■□□□□ 0.34
Hist1h1dP43277 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hist1h1dP43277 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1dP43277 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1dP43277 Golph3-202ENSMUST00000226517 2359 ntBASIC17.15■□□□□ 0.34
Hist1h1dP43277 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1dP43277 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1dP43277 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1dP43277 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms