Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh2P43247 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Msh2P43247 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Msh2P43247 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh2P43247 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
Msh2P43247 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.92■□□□□ 0.94
Msh2P43247 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Msh2P43247 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh2P43247 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh2P43247 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Msh2P43247 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.92■□□□□ 0.94
Msh2P43247 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh2P43247 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh2P43247 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Msh2P43247 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh2P43247 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Msh2P43247 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.91■□□□□ 0.94
Msh2P43247 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh2P43247 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Msh2P43247 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Msh2P43247 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh2P43247 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Msh2P43247 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Msh2P43247 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Msh2P43247 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh2P43247 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh2P43247 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh2P43247 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.9■□□□□ 0.94
Msh2P43247 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Msh2P43247 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Msh2P43247 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
Msh2P43247 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Msh2P43247 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Msh2P43247 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.89■□□□□ 0.94
Msh2P43247 Gm15546-201ENSMUST00000122095 826 ntBASIC20.89■□□□□ 0.93
Msh2P43247 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.89■□□□□ 0.93
Msh2P43247 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh2P43247 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh2P43247 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh2P43247 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh2P43247 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Msh2P43247 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh2P43247 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh2P43247 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh2P43247 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh2P43247 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh2P43247 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh2P43247 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Msh2P43247 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.88■□□□□ 0.93
Msh2P43247 Gm10232-201ENSMUST00000089221 720 ntBASIC20.88■□□□□ 0.93
Msh2P43247 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh2P43247 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Msh2P43247 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Msh2P43247 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.88■□□□□ 0.93
Msh2P43247 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh2P43247 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh2P43247 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh2P43247 Gm15820-201ENSMUST00000201566 728 ntBASIC20.87■□□□□ 0.93
Msh2P43247 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Msh2P43247 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh2P43247 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh2P43247 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Msh2P43247 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Msh2P43247 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Msh2P43247 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Msh2P43247 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.86■□□□□ 0.93
Msh2P43247 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Msh2P43247 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.86■□□□□ 0.93
Msh2P43247 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh2P43247 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh2P43247 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh2P43247 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Msh2P43247 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh2P43247 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh2P43247 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh2P43247 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh2P43247 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Msh2P43247 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Msh2P43247 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.85■□□□□ 0.93
Msh2P43247 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh2P43247 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh2P43247 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Msh2P43247 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Msh2P43247 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msh2P43247 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Msh2P43247 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.83■□□□□ 0.93
Msh2P43247 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Msh2P43247 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh2P43247 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh2P43247 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.83■□□□□ 0.92
Msh2P43247 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh2P43247 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Msh2P43247 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh2P43247 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh2P43247 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh2P43247 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Msh2P43247 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh2P43247 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Msh2P43247 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.82■□□□□ 0.92
Msh2P43247 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms