Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-2P42586 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.71■□□□□ 0.59
Nkx2-2P42586 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.71■□□□□ 0.59
Nkx2-2P42586 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-2P42586 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-2P42586 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Nkx2-2P42586 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Nkx2-2P42586 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-2P42586 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Nkx2-2P42586 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-2P42586 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-2P42586 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-2P42586 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-2P42586 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nkx2-2P42586 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-2P42586 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-2P42586 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Nkx2-2P42586 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.69■□□□□ 0.58
Nkx2-2P42586 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-2P42586 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-2P42586 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-2P42586 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-2P42586 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nkx2-2P42586 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-2P42586 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-2P42586 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-2P42586 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx2-2P42586 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.67■□□□□ 0.58
Nkx2-2P42586 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-2P42586 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.66■□□□□ 0.58
Nkx2-2P42586 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx2-2P42586 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-2P42586 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-2P42586 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-2P42586 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-2P42586 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-2P42586 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-2P42586 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.65■□□□□ 0.58
Nkx2-2P42586 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-2P42586 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx2-2P42586 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx2-2P42586 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Nkx2-2P42586 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-2P42586 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-2P42586 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.64■□□□□ 0.57
Nkx2-2P42586 Gm43530-201ENSMUST00000195920 274 ntBASIC18.64■□□□□ 0.57
Nkx2-2P42586 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-2P42586 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-2P42586 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-2P42586 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-2P42586 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-2P42586 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx2-2P42586 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-2P42586 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Nkx2-2P42586 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Nkx2-2P42586 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-2P42586 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-2P42586 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.63■□□□□ 0.57
Nkx2-2P42586 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-2P42586 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.63■□□□□ 0.57
Nkx2-2P42586 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-2P42586 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx2-2P42586 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-2P42586 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkx2-2P42586 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-2P42586 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Nkx2-2P42586 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-2P42586 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx2-2P42586 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.62■□□□□ 0.57
Nkx2-2P42586 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms