Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca1P41233 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca1P41233 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca1P41233 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca1P41233 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Abca1P41233 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.79■□□□□ 0.28
Abca1P41233 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abca1P41233 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Abca1P41233 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abca1P41233 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca1P41233 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Abca1P41233 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Abca1P41233 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca1P41233 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca1P41233 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Abca1P41233 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Abca1P41233 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.77■□□□□ 0.28
Abca1P41233 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Abca1P41233 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca1P41233 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca1P41233 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca1P41233 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca1P41233 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Abca1P41233 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Abca1P41233 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Abca1P41233 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.77■□□□□ 0.27
Abca1P41233 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abca1P41233 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abca1P41233 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Abca1P41233 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Abca1P41233 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca1P41233 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Abca1P41233 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.76■□□□□ 0.27
Abca1P41233 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Abca1P41233 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca1P41233 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca1P41233 Gm6277-202ENSMUST00000224036 2779 ntBASIC16.76■□□□□ 0.27
Abca1P41233 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca1P41233 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca1P41233 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Abca1P41233 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Abca1P41233 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca1P41233 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Abca1P41233 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.75■□□□□ 0.27
Abca1P41233 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Abca1P41233 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Abca1P41233 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abca1P41233 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.75■□□□□ 0.27
Abca1P41233 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abca1P41233 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abca1P41233 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abca1P41233 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Abca1P41233 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Abca1P41233 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Abca1P41233 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abca1P41233 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Abca1P41233 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abca1P41233 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Abca1P41233 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Abca1P41233 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca1P41233 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Abca1P41233 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca1P41233 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca1P41233 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.73■□□□□ 0.27
Abca1P41233 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca1P41233 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Abca1P41233 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Abca1P41233 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.72■□□□□ 0.27
Abca1P41233 Gm26833-201ENSMUST00000180899 440 ntBASIC16.72■□□□□ 0.27
Abca1P41233 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.72■□□□□ 0.27
Abca1P41233 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.72■□□□□ 0.27
Abca1P41233 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abca1P41233 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Abca1P41233 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.72■□□□□ 0.27
Abca1P41233 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Abca1P41233 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Abca1P41233 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Abca1P41233 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca1P41233 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Abca1P41233 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca1P41233 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.71■□□□□ 0.27
Abca1P41233 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca1P41233 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Abca1P41233 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abca1P41233 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.71■□□□□ 0.27
Abca1P41233 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Abca1P41233 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Abca1P41233 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Abca1P41233 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Abca1P41233 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Abca1P41233 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.7■□□□□ 0.26
Abca1P41233 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca1P41233 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Abca1P41233 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.7■□□□□ 0.26
Abca1P41233 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Abca1P41233 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Abca1P41233 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Abca1P41233 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.7■□□□□ 0.26
Abca1P41233 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Abca1P41233 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms