Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox6P40645 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sox6P40645 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sox6P40645 Gm5812-201ENSMUST00000061073 957 ntBASIC18.95■□□□□ 0.62
Sox6P40645 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sox6P40645 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sox6P40645 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox6P40645 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sox6P40645 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox6P40645 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.94■□□□□ 0.62
Sox6P40645 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sox6P40645 Gm10232-201ENSMUST00000089221 720 ntBASIC18.94■□□□□ 0.62
Sox6P40645 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sox6P40645 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox6P40645 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sox6P40645 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.93■□□□□ 0.62
Sox6P40645 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Sox6P40645 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sox6P40645 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox6P40645 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Sox6P40645 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox6P40645 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox6P40645 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sox6P40645 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sox6P40645 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sox6P40645 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.92■□□□□ 0.62
Sox6P40645 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sox6P40645 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Sox6P40645 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sox6P40645 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.91■□□□□ 0.62
Sox6P40645 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sox6P40645 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox6P40645 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox6P40645 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sox6P40645 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox6P40645 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sox6P40645 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.9■□□□□ 0.62
Sox6P40645 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.9■□□□□ 0.62
Sox6P40645 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.9■□□□□ 0.62
Sox6P40645 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.9■□□□□ 0.62
Sox6P40645 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sox6P40645 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sox6P40645 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sox6P40645 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sox6P40645 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox6P40645 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox6P40645 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox6P40645 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.89■□□□□ 0.61
Sox6P40645 Gm15546-201ENSMUST00000122095 826 ntBASIC18.89■□□□□ 0.61
Sox6P40645 Gm15820-201ENSMUST00000201566 728 ntBASIC18.89■□□□□ 0.61
Sox6P40645 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox6P40645 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Sox6P40645 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox6P40645 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox6P40645 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sox6P40645 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox6P40645 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.88■□□□□ 0.61
Sox6P40645 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox6P40645 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Sox6P40645 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox6P40645 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sox6P40645 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sox6P40645 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox6P40645 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox6P40645 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox6P40645 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox6P40645 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.87■□□□□ 0.61
Sox6P40645 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox6P40645 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox6P40645 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox6P40645 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox6P40645 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.86■□□□□ 0.61
Sox6P40645 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms