Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HmgclP38060 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HmgclP38060 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HmgclP38060 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HmgclP38060 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HmgclP38060 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HmgclP38060 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HmgclP38060 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HmgclP38060 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HmgclP38060 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HmgclP38060 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
HmgclP38060 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
HmgclP38060 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.07■□□□□ 0.8
HmgclP38060 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HmgclP38060 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HmgclP38060 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HmgclP38060 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
HmgclP38060 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HmgclP38060 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.07■□□□□ 0.8
HmgclP38060 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.07■□□□□ 0.8
HmgclP38060 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HmgclP38060 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HmgclP38060 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HmgclP38060 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HmgclP38060 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HmgclP38060 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HmgclP38060 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
HmgclP38060 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.06■□□□□ 0.8
HmgclP38060 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.06■□□□□ 0.8
HmgclP38060 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HmgclP38060 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HmgclP38060 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HmgclP38060 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HmgclP38060 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
HmgclP38060 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HmgclP38060 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HmgclP38060 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HmgclP38060 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HmgclP38060 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HmgclP38060 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HmgclP38060 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HmgclP38060 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HmgclP38060 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HmgclP38060 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HmgclP38060 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HmgclP38060 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HmgclP38060 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HmgclP38060 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HmgclP38060 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HmgclP38060 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HmgclP38060 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HmgclP38060 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.03■□□□□ 0.8
HmgclP38060 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.03■□□□□ 0.8
HmgclP38060 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HmgclP38060 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HmgclP38060 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HmgclP38060 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HmgclP38060 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HmgclP38060 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HmgclP38060 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.02■□□□□ 0.8
HmgclP38060 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HmgclP38060 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HmgclP38060 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.02■□□□□ 0.8
HmgclP38060 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
HmgclP38060 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
HmgclP38060 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HmgclP38060 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HmgclP38060 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Gm43530-201ENSMUST00000195920 274 ntBASIC20.01■□□□□ 0.79
HmgclP38060 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HmgclP38060 Hsf1-207ENSMUST00000228371 2102 ntBASIC20■□□□□ 0.79
HmgclP38060 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
HmgclP38060 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
HmgclP38060 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20■□□□□ 0.79
HmgclP38060 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HmgclP38060 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
HmgclP38060 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HmgclP38060 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HmgclP38060 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HmgclP38060 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HmgclP38060 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HmgclP38060 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms