Protein–RNA interactions for Protein: P35980

Rpl18, 60S ribosomal protein L18, mousemouse

Known RBP Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl18P35980 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl18P35980 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl18P35980 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl18P35980 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl18P35980 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl18P35980 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rpl18P35980 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl18P35980 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl18P35980 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl18P35980 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rpl18P35980 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rpl18P35980 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl18P35980 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rpl18P35980 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl18P35980 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rpl18P35980 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rpl18P35980 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl18P35980 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Rpl18P35980 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl18P35980 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl18P35980 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rpl18P35980 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl18P35980 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.28■□□□□ 0.52
Rpl18P35980 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rpl18P35980 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl18P35980 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl18P35980 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl18P35980 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rpl18P35980 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl18P35980 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.27■□□□□ 0.52
Rpl18P35980 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.27■□□□□ 0.52
Rpl18P35980 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Rpl18P35980 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rpl18P35980 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rpl18P35980 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.26■□□□□ 0.51
Rpl18P35980 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.26■□□□□ 0.51
Rpl18P35980 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Rpl18P35980 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rpl18P35980 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl18P35980 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl18P35980 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.25■□□□□ 0.51
Rpl18P35980 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl18P35980 Notumos-201ENSMUST00000151998 2659 ntBASIC18.25■□□□□ 0.51
Rpl18P35980 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.25■□□□□ 0.51
Rpl18P35980 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rpl18P35980 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.25■□□□□ 0.51
Rpl18P35980 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
Rpl18P35980 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rpl18P35980 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl18P35980 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl18P35980 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl18P35980 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl18P35980 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rpl18P35980 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.24■□□□□ 0.51
Rpl18P35980 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.24■□□□□ 0.51
Rpl18P35980 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Rpl18P35980 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rpl18P35980 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl18P35980 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl18P35980 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl18P35980 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl18P35980 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rpl18P35980 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rpl18P35980 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.22■□□□□ 0.51
Rpl18P35980 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.22■□□□□ 0.51
Rpl18P35980 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.22■□□□□ 0.51
Rpl18P35980 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rpl18P35980 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rpl18P35980 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl18P35980 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rpl18P35980 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms