Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxa1P35582 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxa1P35582 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Foxa1P35582 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxa1P35582 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.8■□□□□ 0.6
Foxa1P35582 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.8■□□□□ 0.6
Foxa1P35582 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxa1P35582 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Foxa1P35582 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxa1P35582 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxa1P35582 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxa1P35582 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxa1P35582 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Foxa1P35582 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxa1P35582 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Foxa1P35582 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Foxa1P35582 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxa1P35582 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Foxa1P35582 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Foxa1P35582 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Foxa1P35582 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.78■□□□□ 0.6
Foxa1P35582 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Foxa1P35582 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Foxa1P35582 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Foxa1P35582 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Foxa1P35582 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Foxa1P35582 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Foxa1P35582 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxa1P35582 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxa1P35582 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.77■□□□□ 0.6
Foxa1P35582 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Foxa1P35582 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Foxa1P35582 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.77■□□□□ 0.6
Foxa1P35582 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Foxa1P35582 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.77■□□□□ 0.6
Foxa1P35582 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Foxa1P35582 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxa1P35582 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.76■□□□□ 0.59
Foxa1P35582 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Foxa1P35582 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxa1P35582 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Foxa1P35582 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxa1P35582 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Foxa1P35582 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Foxa1P35582 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxa1P35582 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxa1P35582 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Foxa1P35582 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Foxa1P35582 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.75■□□□□ 0.59
Foxa1P35582 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.75■□□□□ 0.59
Foxa1P35582 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
Foxa1P35582 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Foxa1P35582 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Foxa1P35582 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.75■□□□□ 0.59
Foxa1P35582 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Foxa1P35582 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.74■□□□□ 0.59
Foxa1P35582 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.74■□□□□ 0.59
Foxa1P35582 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.74■□□□□ 0.59
Foxa1P35582 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Foxa1P35582 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.73■□□□□ 0.59
Foxa1P35582 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.73■□□□□ 0.59
Foxa1P35582 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.73■□□□□ 0.59
Foxa1P35582 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Foxa1P35582 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Foxa1P35582 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Foxa1P35582 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Foxa1P35582 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms