Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc6a11P31650 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Slc6a11P31650 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Slc6a11P31650 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Slc6a11P31650 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.25■□□□□ 0.67
Slc6a11P31650 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc6a11P31650 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Slc6a11P31650 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.24■□□□□ 0.67
Slc6a11P31650 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Slc6a11P31650 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc6a11P31650 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.23■□□□□ 0.67
Slc6a11P31650 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.23■□□□□ 0.67
Slc6a11P31650 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a11P31650 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a11P31650 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a11P31650 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Slc6a11P31650 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc6a11P31650 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a11P31650 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Slc6a11P31650 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a11P31650 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc6a11P31650 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.21■□□□□ 0.67
Slc6a11P31650 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc6a11P31650 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc6a11P31650 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc6a11P31650 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.21■□□□□ 0.67
Slc6a11P31650 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc6a11P31650 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a11P31650 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a11P31650 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.2■□□□□ 0.66
Slc6a11P31650 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a11P31650 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a11P31650 Gm13241-201ENSMUST00000094493 780 ntBASIC19.2■□□□□ 0.66
Slc6a11P31650 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a11P31650 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc6a11P31650 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.19■□□□□ 0.66
Slc6a11P31650 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.19■□□□□ 0.66
Slc6a11P31650 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.19■□□□□ 0.66
Slc6a11P31650 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Slc6a11P31650 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a11P31650 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a11P31650 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Slc6a11P31650 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a11P31650 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.18■□□□□ 0.66
Slc6a11P31650 Gm7417-201ENSMUST00000192950 473 ntBASIC19.18■□□□□ 0.66
Slc6a11P31650 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a11P31650 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Slc6a11P31650 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a11P31650 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a11P31650 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slc6a11P31650 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a11P31650 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a11P31650 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.17■□□□□ 0.66
Slc6a11P31650 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Slc6a11P31650 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.17■□□□□ 0.66
Slc6a11P31650 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a11P31650 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a11P31650 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a11P31650 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a11P31650 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a11P31650 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slc6a11P31650 Golph3-202ENSMUST00000226517 2359 ntBASIC19.17■□□□□ 0.66
Slc6a11P31650 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a11P31650 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a11P31650 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms