Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfbP31240 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfbP31240 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PdgfbP31240 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PdgfbP31240 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PdgfbP31240 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
PdgfbP31240 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.64■□□□□ 0.89
PdgfbP31240 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfbP31240 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfbP31240 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfbP31240 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfbP31240 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PdgfbP31240 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfbP31240 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfbP31240 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.63■□□□□ 0.89
PdgfbP31240 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PdgfbP31240 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfbP31240 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfbP31240 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfbP31240 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PdgfbP31240 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.62■□□□□ 0.89
PdgfbP31240 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfbP31240 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfbP31240 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfbP31240 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfbP31240 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.62■□□□□ 0.89
PdgfbP31240 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfbP31240 Gm9988-201ENSMUST00000069786 435 ntBASIC20.62■□□□□ 0.89
PdgfbP31240 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfbP31240 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfbP31240 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfbP31240 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfbP31240 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfbP31240 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfbP31240 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfbP31240 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PdgfbP31240 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.61■□□□□ 0.89
PdgfbP31240 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfbP31240 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfbP31240 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PdgfbP31240 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PdgfbP31240 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfbP31240 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfbP31240 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfbP31240 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
PdgfbP31240 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfbP31240 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfbP31240 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PdgfbP31240 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.6■□□□□ 0.89
PdgfbP31240 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PdgfbP31240 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfbP31240 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PdgfbP31240 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfbP31240 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfbP31240 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PdgfbP31240 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PdgfbP31240 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfbP31240 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfbP31240 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
PdgfbP31240 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfbP31240 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfbP31240 Nespas-201ENSMUST00000143738 1083 ntBASIC20.58■□□□□ 0.89
PdgfbP31240 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfbP31240 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfbP31240 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PdgfbP31240 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PdgfbP31240 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PdgfbP31240 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PdgfbP31240 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.57■□□□□ 0.88
PdgfbP31240 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PdgfbP31240 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PdgfbP31240 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PdgfbP31240 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
PdgfbP31240 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PdgfbP31240 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfbP31240 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfbP31240 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfbP31240 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.56■□□□□ 0.88
PdgfbP31240 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfbP31240 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.56■□□□□ 0.88
PdgfbP31240 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PdgfbP31240 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.56■□□□□ 0.88
PdgfbP31240 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.56■□□□□ 0.88
PdgfbP31240 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfbP31240 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfbP31240 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PdgfbP31240 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfbP31240 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PdgfbP31240 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms