Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd8P29595 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Nedd8P29595 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd8P29595 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd8P29595 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd8P29595 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nedd8P29595 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.77■□□□□ 0.6
Nedd8P29595 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd8P29595 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.77■□□□□ 0.6
Nedd8P29595 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd8P29595 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd8P29595 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd8P29595 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nedd8P29595 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nedd8P29595 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Nedd8P29595 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.76■□□□□ 0.59
Nedd8P29595 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nedd8P29595 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.76■□□□□ 0.59
Nedd8P29595 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nedd8P29595 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd8P29595 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.75■□□□□ 0.59
Nedd8P29595 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Nedd8P29595 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd8P29595 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd8P29595 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd8P29595 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nedd8P29595 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nedd8P29595 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.74■□□□□ 0.59
Nedd8P29595 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.74■□□□□ 0.59
Nedd8P29595 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.74■□□□□ 0.59
Nedd8P29595 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd8P29595 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.73■□□□□ 0.59
Nedd8P29595 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.73■□□□□ 0.59
Nedd8P29595 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd8P29595 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd8P29595 Gm45364-201ENSMUST00000210883 159 ntBASIC18.73■□□□□ 0.59
Nedd8P29595 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd8P29595 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nedd8P29595 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.73■□□□□ 0.59
Nedd8P29595 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd8P29595 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Nedd8P29595 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.72■□□□□ 0.59
Nedd8P29595 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nedd8P29595 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd8P29595 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.71■□□□□ 0.59
Nedd8P29595 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.71■□□□□ 0.59
Nedd8P29595 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.71■□□□□ 0.59
Nedd8P29595 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd8P29595 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nedd8P29595 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nedd8P29595 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Nedd8P29595 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd8P29595 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Nedd8P29595 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd8P29595 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd8P29595 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd8P29595 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd8P29595 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd8P29595 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd8P29595 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd8P29595 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.69■□□□□ 0.58
Nedd8P29595 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nedd8P29595 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms