Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfrsf1bP25119 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf1bP25119 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tnfrsf1bP25119 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf1bP25119 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf1bP25119 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfrsf1bP25119 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tnfrsf1bP25119 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfrsf1bP25119 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Golgb1-201ENSMUST00000023534 498 ntBASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfrsf1bP25119 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.79■□□□□ 0.6
Tnfrsf1bP25119 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1bP25119 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnfrsf1bP25119 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1bP25119 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1bP25119 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfrsf1bP25119 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf1bP25119 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf1bP25119 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf1bP25119 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf1bP25119 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf1bP25119 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf1bP25119 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf1bP25119 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf1bP25119 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Gm13241-201ENSMUST00000094493 780 ntBASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf1bP25119 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf1bP25119 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf1bP25119 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms