Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.44■□□□□ 0.7
BdnfP21237 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.44■□□□□ 0.7
BdnfP21237 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BdnfP21237 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.43■□□□□ 0.7
BdnfP21237 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BdnfP21237 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.43■□□□□ 0.7
BdnfP21237 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BdnfP21237 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.43■□□□□ 0.7
BdnfP21237 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BdnfP21237 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BdnfP21237 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BdnfP21237 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
BdnfP21237 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BdnfP21237 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BdnfP21237 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.41■□□□□ 0.7
BdnfP21237 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BdnfP21237 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.41■□□□□ 0.7
BdnfP21237 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.41■□□□□ 0.7
BdnfP21237 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.41■□□□□ 0.7
BdnfP21237 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.41■□□□□ 0.7
BdnfP21237 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BdnfP21237 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BdnfP21237 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.41■□□□□ 0.7
BdnfP21237 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BdnfP21237 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BdnfP21237 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.41■□□□□ 0.7
BdnfP21237 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BdnfP21237 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
BdnfP21237 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.4■□□□□ 0.7
BdnfP21237 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
BdnfP21237 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
BdnfP21237 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BdnfP21237 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BdnfP21237 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BdnfP21237 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BdnfP21237 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BdnfP21237 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BdnfP21237 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.39■□□□□ 0.7
BdnfP21237 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BdnfP21237 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BdnfP21237 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BdnfP21237 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BdnfP21237 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BdnfP21237 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BdnfP21237 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BdnfP21237 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.39■□□□□ 0.69
BdnfP21237 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.39■□□□□ 0.69
BdnfP21237 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.39■□□□□ 0.69
BdnfP21237 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BdnfP21237 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BdnfP21237 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BdnfP21237 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BdnfP21237 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
BdnfP21237 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BdnfP21237 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BdnfP21237 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BdnfP21237 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.38■□□□□ 0.69
BdnfP21237 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
BdnfP21237 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BdnfP21237 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BdnfP21237 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BdnfP21237 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BdnfP21237 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
BdnfP21237 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
BdnfP21237 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BdnfP21237 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BdnfP21237 Gm13238-201ENSMUST00000117655 780 ntBASIC19.37■□□□□ 0.69
BdnfP21237 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.37■□□□□ 0.69
BdnfP21237 Gm45444-201ENSMUST00000211394 898 ntBASIC19.37■□□□□ 0.69
BdnfP21237 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BdnfP21237 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.37■□□□□ 0.69
BdnfP21237 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BdnfP21237 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
BdnfP21237 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BdnfP21237 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms