Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.63■□□□□ 0.89
VimP20152 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
VimP20152 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
VimP20152 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VimP20152 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.61■□□□□ 0.89
VimP20152 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VimP20152 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VimP20152 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.61■□□□□ 0.89
VimP20152 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VimP20152 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.61■□□□□ 0.89
VimP20152 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VimP20152 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
VimP20152 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
VimP20152 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
VimP20152 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VimP20152 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
VimP20152 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VimP20152 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VimP20152 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
VimP20152 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
VimP20152 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
VimP20152 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
VimP20152 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.6■□□□□ 0.89
VimP20152 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
VimP20152 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
VimP20152 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VimP20152 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VimP20152 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.59■□□□□ 0.89
VimP20152 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
VimP20152 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VimP20152 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VimP20152 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
VimP20152 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
VimP20152 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VimP20152 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
VimP20152 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
VimP20152 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
VimP20152 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
VimP20152 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VimP20152 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VimP20152 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
VimP20152 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VimP20152 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
VimP20152 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
VimP20152 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VimP20152 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VimP20152 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VimP20152 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VimP20152 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VimP20152 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.57■□□□□ 0.88
VimP20152 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
VimP20152 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VimP20152 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VimP20152 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VimP20152 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VimP20152 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VimP20152 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
VimP20152 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VimP20152 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VimP20152 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VimP20152 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VimP20152 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
VimP20152 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VimP20152 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VimP20152 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.56■□□□□ 0.88
VimP20152 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.56■□□□□ 0.88
VimP20152 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.56■□□□□ 0.88
VimP20152 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.56■□□□□ 0.88
VimP20152 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VimP20152 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VimP20152 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.55■□□□□ 0.88
VimP20152 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VimP20152 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VimP20152 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VimP20152 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VimP20152 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.55■□□□□ 0.88
VimP20152 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.55■□□□□ 0.88
VimP20152 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
VimP20152 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
VimP20152 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VimP20152 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VimP20152 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VimP20152 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VimP20152 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.54■□□□□ 0.88
VimP20152 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VimP20152 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
VimP20152 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VimP20152 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
VimP20152 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VimP20152 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VimP20152 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
VimP20152 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms