Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cntn1P12960 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cntn1P12960 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cntn1P12960 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cntn1P12960 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cntn1P12960 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cntn1P12960 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cntn1P12960 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cntn1P12960 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cntn1P12960 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cntn1P12960 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cntn1P12960 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Cntn1P12960 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.48■□□□□ 0.71
Cntn1P12960 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Cntn1P12960 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cntn1P12960 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cntn1P12960 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cntn1P12960 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cntn1P12960 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.47■□□□□ 0.71
Cntn1P12960 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.47■□□□□ 0.71
Cntn1P12960 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Cntn1P12960 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cntn1P12960 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cntn1P12960 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cntn1P12960 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cntn1P12960 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cntn1P12960 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cntn1P12960 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn1P12960 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.46■□□□□ 0.71
Cntn1P12960 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn1P12960 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn1P12960 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.46■□□□□ 0.71
Cntn1P12960 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.46■□□□□ 0.71
Cntn1P12960 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn1P12960 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn1P12960 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cntn1P12960 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn1P12960 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cntn1P12960 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn1P12960 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn1P12960 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.45■□□□□ 0.7
Cntn1P12960 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn1P12960 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn1P12960 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.45■□□□□ 0.7
Cntn1P12960 Gm43530-201ENSMUST00000195920 274 ntBASIC19.45■□□□□ 0.7
Cntn1P12960 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn1P12960 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cntn1P12960 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.44■□□□□ 0.7
Cntn1P12960 Gm43137-201ENSMUST00000198052 594 ntBASIC19.44■□□□□ 0.7
Cntn1P12960 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cntn1P12960 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn1P12960 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn1P12960 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn1P12960 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn1P12960 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn1P12960 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn1P12960 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn1P12960 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cntn1P12960 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cntn1P12960 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Cntn1P12960 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cntn1P12960 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Cntn1P12960 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cntn1P12960 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cntn1P12960 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.42■□□□□ 0.7
Cntn1P12960 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn1P12960 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cntn1P12960 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.41■□□□□ 0.7
Cntn1P12960 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn1P12960 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.41■□□□□ 0.7
Cntn1P12960 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn1P12960 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cntn1P12960 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn1P12960 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cntn1P12960 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn1P12960 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn1P12960 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.4■□□□□ 0.7
Cntn1P12960 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn1P12960 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.4■□□□□ 0.7
Cntn1P12960 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cntn1P12960 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn1P12960 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn1P12960 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn1P12960 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntn1P12960 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn1P12960 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Cntn1P12960 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn1P12960 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn1P12960 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn1P12960 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cntn1P12960 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms