Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Cxcl1P12850 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cxcl1P12850 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.84■□□□□ 0.29
Cxcl1P12850 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 Gm11175-201ENSMUST00000116172 543 ntBASIC16.84■□□□□ 0.29
Cxcl1P12850 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cxcl1P12850 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.83■□□□□ 0.28
Cxcl1P12850 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl1P12850 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.83■□□□□ 0.28
Cxcl1P12850 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl1P12850 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl1P12850 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cxcl1P12850 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Cxcl1P12850 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.82■□□□□ 0.28
Cxcl1P12850 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl1P12850 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl1P12850 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl1P12850 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl1P12850 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.82■□□□□ 0.28
Cxcl1P12850 Gm10420-201ENSMUST00000121713 882 ntBASIC16.82■□□□□ 0.28
Cxcl1P12850 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl1P12850 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.82■□□□□ 0.28
Cxcl1P12850 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl1P12850 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cxcl1P12850 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl1P12850 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cxcl1P12850 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cxcl1P12850 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl1P12850 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.81■□□□□ 0.28
Cxcl1P12850 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl1P12850 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.81■□□□□ 0.28
Cxcl1P12850 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.81■□□□□ 0.28
Cxcl1P12850 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl1P12850 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cxcl1P12850 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cxcl1P12850 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl1P12850 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cxcl1P12850 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cxcl1P12850 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl1P12850 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cxcl1P12850 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl1P12850 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cxcl1P12850 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cxcl1P12850 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl1P12850 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl1P12850 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cxcl1P12850 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.79■□□□□ 0.28
Cxcl1P12850 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Cxcl1P12850 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.79■□□□□ 0.28
Cxcl1P12850 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.79■□□□□ 0.28
Cxcl1P12850 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cxcl1P12850 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cxcl1P12850 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cxcl1P12850 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.78■□□□□ 0.28
Cxcl1P12850 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.78■□□□□ 0.28
Cxcl1P12850 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cxcl1P12850 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cxcl1P12850 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl1P12850 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl1P12850 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl1P12850 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.77■□□□□ 0.28
Cxcl1P12850 Gm12366-201ENSMUST00000121722 873 ntBASIC16.77■□□□□ 0.28
Cxcl1P12850 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.77■□□□□ 0.28
Cxcl1P12850 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl1P12850 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.77■□□□□ 0.28
Cxcl1P12850 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.77■□□□□ 0.28
Cxcl1P12850 Gm5786-201ENSMUST00000085368 882 ntBASIC16.77■□□□□ 0.28
Cxcl1P12850 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl1P12850 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cxcl1P12850 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl1P12850 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cxcl1P12850 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cxcl1P12850 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.76■□□□□ 0.27
Cxcl1P12850 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms