Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim1P0C8K7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smim1P0C8K7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim1P0C8K7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.05□□□□□ -0.16
Smim1P0C8K7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim1P0C8K7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim1P0C8K7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim1P0C8K7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim1P0C8K7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim1P0C8K7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim1P0C8K7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim1P0C8K7 Rarb-207ENSMUST00000225921 2756 ntBASIC14.03□□□□□ -0.16
Smim1P0C8K7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim1P0C8K7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim1P0C8K7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.02□□□□□ -0.16
Smim1P0C8K7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smim1P0C8K7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Smim1P0C8K7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Smim1P0C8K7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim1P0C8K7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.02□□□□□ -0.17
Smim1P0C8K7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smim1P0C8K7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.02□□□□□ -0.17
Smim1P0C8K7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smim1P0C8K7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim1P0C8K7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Smim1P0C8K7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.01□□□□□ -0.17
Smim1P0C8K7 Zfp131-205ENSMUST00000223812 663 ntBASIC14.01□□□□□ -0.17
Smim1P0C8K7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim1P0C8K7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim1P0C8K7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Smim1P0C8K7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim1P0C8K7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim1P0C8K7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smim1P0C8K7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14□□□□□ -0.17
Smim1P0C8K7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim1P0C8K7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim1P0C8K7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Smim1P0C8K7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Smim1P0C8K7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim1P0C8K7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14□□□□□ -0.17
Smim1P0C8K7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Smim1P0C8K7 Gm9397-201ENSMUST00000200125 605 ntBASIC14□□□□□ -0.17
Smim1P0C8K7 AC153911.1-201ENSMUST00000220378 758 ntBASIC14□□□□□ -0.17
Smim1P0C8K7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim1P0C8K7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Smim1P0C8K7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Smim1P0C8K7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Smim1P0C8K7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Smim1P0C8K7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC13.99□□□□□ -0.17
Smim1P0C8K7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Smim1P0C8K7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms