Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.24■□□□□ 0.67
Krt1P04104 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Krt1P04104 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Krt1P04104 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Krt1P04104 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Krt1P04104 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt1P04104 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt1P04104 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt1P04104 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Krt1P04104 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Krt1P04104 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Krt1P04104 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Krt1P04104 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Krt1P04104 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt1P04104 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.22■□□□□ 0.67
Krt1P04104 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt1P04104 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Krt1P04104 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.22■□□□□ 0.67
Krt1P04104 Gm6821-201ENSMUST00000107540 542 ntBASIC19.22■□□□□ 0.67
Krt1P04104 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt1P04104 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt1P04104 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt1P04104 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt1P04104 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Krt1P04104 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Krt1P04104 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.21■□□□□ 0.67
Krt1P04104 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Krt1P04104 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.21■□□□□ 0.67
Krt1P04104 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Krt1P04104 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Krt1P04104 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Krt1P04104 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt1P04104 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Krt1P04104 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt1P04104 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Krt1P04104 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt1P04104 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt1P04104 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Krt1P04104 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Krt1P04104 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt1P04104 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Krt1P04104 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Krt1P04104 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt1P04104 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Krt1P04104 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.18■□□□□ 0.66
Krt1P04104 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt1P04104 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt1P04104 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt1P04104 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt1P04104 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Krt1P04104 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.17■□□□□ 0.66
Krt1P04104 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt1P04104 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Krt1P04104 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt1P04104 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt1P04104 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt1P04104 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Krt1P04104 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt1P04104 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.16■□□□□ 0.66
Krt1P04104 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt1P04104 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.15■□□□□ 0.66
Krt1P04104 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.15■□□□□ 0.66
Krt1P04104 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt1P04104 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Krt1P04104 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Krt1P04104 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt1P04104 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt1P04104 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Krt1P04104 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt1P04104 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt1P04104 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Krt1P04104 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.15■□□□□ 0.66
Krt1P04104 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt1P04104 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Krt1P04104 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Krt1P04104 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krt1P04104 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krt1P04104 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Krt1P04104 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Krt1P04104 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt1P04104 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms