Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CopeO89079 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CopeO89079 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.96■□□□□ 0.95
CopeO89079 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.96■□□□□ 0.95
CopeO89079 Gm12366-201ENSMUST00000121722 873 ntBASIC20.96■□□□□ 0.95
CopeO89079 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.96■□□□□ 0.95
CopeO89079 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.96■□□□□ 0.95
CopeO89079 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.96■□□□□ 0.95
CopeO89079 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.96■□□□□ 0.95
CopeO89079 Gm5786-201ENSMUST00000085368 882 ntBASIC20.96■□□□□ 0.95
CopeO89079 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CopeO89079 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CopeO89079 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.95■□□□□ 0.94
CopeO89079 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.95■□□□□ 0.94
CopeO89079 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CopeO89079 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CopeO89079 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CopeO89079 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CopeO89079 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CopeO89079 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CopeO89079 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CopeO89079 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CopeO89079 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CopeO89079 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CopeO89079 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CopeO89079 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CopeO89079 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CopeO89079 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CopeO89079 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CopeO89079 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CopeO89079 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CopeO89079 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CopeO89079 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CopeO89079 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CopeO89079 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CopeO89079 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CopeO89079 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CopeO89079 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CopeO89079 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CopeO89079 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CopeO89079 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CopeO89079 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CopeO89079 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CopeO89079 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CopeO89079 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CopeO89079 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CopeO89079 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CopeO89079 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CopeO89079 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.91■□□□□ 0.94
CopeO89079 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CopeO89079 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.91■□□□□ 0.94
CopeO89079 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CopeO89079 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CopeO89079 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CopeO89079 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CopeO89079 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CopeO89079 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CopeO89079 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CopeO89079 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CopeO89079 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CopeO89079 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CopeO89079 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.89■□□□□ 0.93
CopeO89079 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CopeO89079 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CopeO89079 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CopeO89079 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.89■□□□□ 0.93
CopeO89079 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.89■□□□□ 0.93
CopeO89079 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CopeO89079 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CopeO89079 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CopeO89079 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CopeO89079 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.88■□□□□ 0.93
CopeO89079 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
CopeO89079 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CopeO89079 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CopeO89079 Golph3-202ENSMUST00000226517 2359 ntBASIC20.87■□□□□ 0.93
CopeO89079 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
CopeO89079 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CopeO89079 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CopeO89079 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CopeO89079 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CopeO89079 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CopeO89079 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CopeO89079 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms