Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClppO88696 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClppO88696 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ClppO88696 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ClppO88696 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ClppO88696 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ClppO88696 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.69■□□□□ 0.74
ClppO88696 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClppO88696 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClppO88696 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClppO88696 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClppO88696 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ClppO88696 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ClppO88696 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ClppO88696 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClppO88696 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.68■□□□□ 0.74
ClppO88696 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClppO88696 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClppO88696 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClppO88696 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClppO88696 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClppO88696 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ClppO88696 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.67■□□□□ 0.74
ClppO88696 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ClppO88696 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
ClppO88696 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ClppO88696 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClppO88696 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClppO88696 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ClppO88696 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClppO88696 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ClppO88696 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
ClppO88696 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ClppO88696 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.66■□□□□ 0.74
ClppO88696 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClppO88696 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClppO88696 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ClppO88696 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClppO88696 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.65■□□□□ 0.74
ClppO88696 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.65■□□□□ 0.74
ClppO88696 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.65■□□□□ 0.74
ClppO88696 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
ClppO88696 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.65■□□□□ 0.74
ClppO88696 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.65■□□□□ 0.74
ClppO88696 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.65■□□□□ 0.74
ClppO88696 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ClppO88696 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClppO88696 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ClppO88696 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ClppO88696 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ClppO88696 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClppO88696 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClppO88696 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.63■□□□□ 0.73
ClppO88696 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.63■□□□□ 0.73
ClppO88696 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClppO88696 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ClppO88696 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
ClppO88696 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.63■□□□□ 0.73
ClppO88696 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ClppO88696 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClppO88696 Golph3-202ENSMUST00000226517 2359 ntBASIC19.63■□□□□ 0.73
ClppO88696 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClppO88696 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClppO88696 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClppO88696 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClppO88696 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.62■□□□□ 0.73
ClppO88696 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ClppO88696 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ClppO88696 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClppO88696 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.62■□□□□ 0.73
ClppO88696 Gm45417-201ENSMUST00000209533 758 ntBASIC19.62■□□□□ 0.73
ClppO88696 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ClppO88696 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.61■□□□□ 0.73
ClppO88696 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.61■□□□□ 0.73
ClppO88696 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ClppO88696 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClppO88696 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
ClppO88696 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClppO88696 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClppO88696 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClppO88696 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ClppO88696 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ClppO88696 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms