Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cops4O88544 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Mir6538-201ENSMUST00000183713 110 ntBASIC18.7■□□□□ 0.58
Cops4O88544 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cops4O88544 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops4O88544 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops4O88544 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cops4O88544 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
Cops4O88544 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cops4O88544 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cops4O88544 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.68■□□□□ 0.58
Cops4O88544 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.68■□□□□ 0.58
Cops4O88544 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops4O88544 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops4O88544 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops4O88544 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cops4O88544 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.68■□□□□ 0.58
Cops4O88544 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.67■□□□□ 0.58
Cops4O88544 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops4O88544 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.67■□□□□ 0.58
Cops4O88544 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cops4O88544 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cops4O88544 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.67■□□□□ 0.58
Cops4O88544 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cops4O88544 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops4O88544 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.67■□□□□ 0.58
Cops4O88544 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops4O88544 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops4O88544 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cops4O88544 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops4O88544 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cops4O88544 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cops4O88544 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cops4O88544 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.66■□□□□ 0.58
Cops4O88544 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.66■□□□□ 0.58
Cops4O88544 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.66■□□□□ 0.58
Cops4O88544 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops4O88544 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cops4O88544 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cops4O88544 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.65■□□□□ 0.58
Cops4O88544 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cops4O88544 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.64■□□□□ 0.57
Cops4O88544 Gm12366-201ENSMUST00000121722 873 ntBASIC18.64■□□□□ 0.57
Cops4O88544 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.64■□□□□ 0.57
Cops4O88544 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.64■□□□□ 0.57
Cops4O88544 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cops4O88544 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.64■□□□□ 0.57
Cops4O88544 Gm5786-201ENSMUST00000085368 882 ntBASIC18.64■□□□□ 0.57
Cops4O88544 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cops4O88544 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops4O88544 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cops4O88544 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops4O88544 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops4O88544 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cops4O88544 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops4O88544 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops4O88544 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops4O88544 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.63■□□□□ 0.57
Cops4O88544 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cops4O88544 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.62■□□□□ 0.57
Cops4O88544 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.62■□□□□ 0.57
Cops4O88544 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.62■□□□□ 0.57
Cops4O88544 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cops4O88544 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.62■□□□□ 0.57
Cops4O88544 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cops4O88544 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cops4O88544 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops4O88544 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops4O88544 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Cops4O88544 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cops4O88544 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms