Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Capns1O88456 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.67■□□□□ 0.58
Capns1O88456 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.67■□□□□ 0.58
Capns1O88456 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.66■□□□□ 0.58
Capns1O88456 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Capns1O88456 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capns1O88456 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capns1O88456 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.65■□□□□ 0.58
Capns1O88456 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capns1O88456 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Capns1O88456 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capns1O88456 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Capns1O88456 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.65■□□□□ 0.58
Capns1O88456 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Capns1O88456 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capns1O88456 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capns1O88456 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capns1O88456 Gm9959-201ENSMUST00000068277 390 ntBASIC18.64■□□□□ 0.57
Capns1O88456 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Capns1O88456 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Capns1O88456 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capns1O88456 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.63■□□□□ 0.57
Capns1O88456 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.63■□□□□ 0.57
Capns1O88456 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.63■□□□□ 0.57
Capns1O88456 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capns1O88456 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capns1O88456 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Capns1O88456 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.62■□□□□ 0.57
Capns1O88456 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.62■□□□□ 0.57
Capns1O88456 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Capns1O88456 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Capns1O88456 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Capns1O88456 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Capns1O88456 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Capns1O88456 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Capns1O88456 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Capns1O88456 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Capns1O88456 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Capns1O88456 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Capns1O88456 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.6■□□□□ 0.57
Capns1O88456 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Capns1O88456 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Capns1O88456 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.59■□□□□ 0.57
Capns1O88456 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Capns1O88456 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Capns1O88456 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Capns1O88456 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms