Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cacna1hO88427 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.15■□□□□ 0.82
Cacna1hO88427 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1hO88427 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1hO88427 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.15■□□□□ 0.82
Cacna1hO88427 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cacna1hO88427 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cacna1hO88427 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1hO88427 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1hO88427 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1hO88427 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1hO88427 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.15■□□□□ 0.82
Cacna1hO88427 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cacna1hO88427 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1hO88427 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1hO88427 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.14■□□□□ 0.82
Cacna1hO88427 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1hO88427 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cacna1hO88427 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cacna1hO88427 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cacna1hO88427 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
Cacna1hO88427 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.13■□□□□ 0.81
Cacna1hO88427 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.13■□□□□ 0.81
Cacna1hO88427 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.13■□□□□ 0.81
Cacna1hO88427 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cacna1hO88427 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1hO88427 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cacna1hO88427 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cacna1hO88427 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cacna1hO88427 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1hO88427 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cacna1hO88427 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cacna1hO88427 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1hO88427 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.12■□□□□ 0.81
Cacna1hO88427 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1hO88427 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1hO88427 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1hO88427 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cacna1hO88427 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1hO88427 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Cacna1hO88427 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1hO88427 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Cacna1hO88427 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cacna1hO88427 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Cacna1hO88427 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1hO88427 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cacna1hO88427 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1hO88427 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cacna1hO88427 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1hO88427 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.1■□□□□ 0.81
Cacna1hO88427 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1hO88427 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.1■□□□□ 0.81
Cacna1hO88427 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cacna1hO88427 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.09■□□□□ 0.81
Cacna1hO88427 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.09■□□□□ 0.81
Cacna1hO88427 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1hO88427 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Cacna1hO88427 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1hO88427 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1hO88427 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1hO88427 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cacna1hO88427 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1hO88427 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.09■□□□□ 0.81
Cacna1hO88427 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cacna1hO88427 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cacna1hO88427 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cacna1hO88427 Gm715-201ENSMUST00000117865 831 ntBASIC20.08■□□□□ 0.81
Cacna1hO88427 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.08■□□□□ 0.8
Cacna1hO88427 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Cacna1hO88427 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.08■□□□□ 0.8
Cacna1hO88427 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cacna1hO88427 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cacna1hO88427 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cacna1hO88427 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Cacna1hO88427 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.07■□□□□ 0.8
Cacna1hO88427 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cacna1hO88427 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cacna1hO88427 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cacna1hO88427 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cacna1hO88427 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1hO88427 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1hO88427 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cacna1hO88427 Gm7290-201ENSMUST00000104990 617 ntBASIC20.06■□□□□ 0.8
Cacna1hO88427 Gm12918-201ENSMUST00000120234 636 ntBASIC20.06■□□□□ 0.8
Cacna1hO88427 Gm15710-201ENSMUST00000121821 636 ntBASIC20.06■□□□□ 0.8
Cacna1hO88427 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.06■□□□□ 0.8
Cacna1hO88427 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Cacna1hO88427 Gm5075-201ENSMUST00000196916 622 ntBASIC20.06■□□□□ 0.8
Cacna1hO88427 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms