Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pde6dO55057 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.03■□□□□ 0.16
Pde6dO55057 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pde6dO55057 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Pde6dO55057 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pde6dO55057 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pde6dO55057 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pde6dO55057 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pde6dO55057 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pde6dO55057 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pde6dO55057 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pde6dO55057 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pde6dO55057 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pde6dO55057 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.02■□□□□ 0.16
Pde6dO55057 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pde6dO55057 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pde6dO55057 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pde6dO55057 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pde6dO55057 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pde6dO55057 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pde6dO55057 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pde6dO55057 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.01■□□□□ 0.15
Pde6dO55057 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.01■□□□□ 0.15
Pde6dO55057 Gm44428-201ENSMUST00000204474 874 ntBASIC16.01■□□□□ 0.15
Pde6dO55057 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pde6dO55057 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pde6dO55057 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pde6dO55057 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pde6dO55057 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pde6dO55057 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pde6dO55057 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pde6dO55057 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Pde6dO55057 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pde6dO55057 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16■□□□□ 0.15
Pde6dO55057 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pde6dO55057 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16■□□□□ 0.15
Pde6dO55057 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pde6dO55057 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Pde6dO55057 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pde6dO55057 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.99■□□□□ 0.15
Pde6dO55057 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.99■□□□□ 0.15
Pde6dO55057 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.99■□□□□ 0.15
Pde6dO55057 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pde6dO55057 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pde6dO55057 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pde6dO55057 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pde6dO55057 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.98■□□□□ 0.15
Pde6dO55057 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pde6dO55057 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.98■□□□□ 0.15
Pde6dO55057 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pde6dO55057 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pde6dO55057 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pde6dO55057 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pde6dO55057 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.98■□□□□ 0.15
Pde6dO55057 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.98■□□□□ 0.15
Pde6dO55057 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Pde6dO55057 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pde6dO55057 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.97■□□□□ 0.15
Pde6dO55057 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.97■□□□□ 0.15
Pde6dO55057 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pde6dO55057 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pde6dO55057 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.97■□□□□ 0.15
Pde6dO55057 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pde6dO55057 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.97■□□□□ 0.15
Pde6dO55057 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pde6dO55057 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pde6dO55057 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pde6dO55057 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pde6dO55057 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pde6dO55057 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Pde6dO55057 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pde6dO55057 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pde6dO55057 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pde6dO55057 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pde6dO55057 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pde6dO55057 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pde6dO55057 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Pde6dO55057 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pde6dO55057 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Pde6dO55057 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.95■□□□□ 0.14
Pde6dO55057 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pde6dO55057 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pde6dO55057 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms