Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Per2O54943 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Per2O54943 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Per2O54943 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Per2O54943 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Per2O54943 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Per2O54943 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Per2O54943 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Per2O54943 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Per2O54943 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Per2O54943 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Per2O54943 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.18■□□□□ 0.98
Per2O54943 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Per2O54943 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Per2O54943 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Per2O54943 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Per2O54943 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.17■□□□□ 0.98
Per2O54943 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Per2O54943 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per2O54943 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.17■□□□□ 0.98
Per2O54943 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Per2O54943 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Per2O54943 Gm15546-201ENSMUST00000122095 826 ntBASIC21.16■□□□□ 0.98
Per2O54943 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.16■□□□□ 0.98
Per2O54943 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Per2O54943 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Per2O54943 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Per2O54943 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Per2O54943 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per2O54943 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Per2O54943 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Per2O54943 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per2O54943 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per2O54943 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.14■□□□□ 0.98
Per2O54943 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Per2O54943 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Per2O54943 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.14■□□□□ 0.97
Per2O54943 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.14■□□□□ 0.97
Per2O54943 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Per2O54943 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Per2O54943 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Per2O54943 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Per2O54943 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Per2O54943 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
Per2O54943 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.13■□□□□ 0.97
Per2O54943 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.13■□□□□ 0.97
Per2O54943 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per2O54943 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per2O54943 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per2O54943 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per2O54943 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per2O54943 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per2O54943 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per2O54943 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per2O54943 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Per2O54943 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Per2O54943 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.11■□□□□ 0.97
Per2O54943 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Per2O54943 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Per2O54943 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Per2O54943 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Per2O54943 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Per2O54943 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per2O54943 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per2O54943 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per2O54943 Gm7143-201ENSMUST00000222811 859 ntBASIC21.1■□□□□ 0.97
Per2O54943 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per2O54943 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per2O54943 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.1■□□□□ 0.97
Per2O54943 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Per2O54943 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Per2O54943 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Per2O54943 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Per2O54943 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.09■□□□□ 0.97
Per2O54943 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Per2O54943 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.08■□□□□ 0.97
Per2O54943 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Per2O54943 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Per2O54943 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Per2O54943 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms