Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Cldn5O54942 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cldn5O54942 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Cldn5O54942 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn5O54942 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn5O54942 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn5O54942 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.2■□□□□ 0.98
Cldn5O54942 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn5O54942 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cldn5O54942 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn5O54942 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn5O54942 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn5O54942 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn5O54942 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn5O54942 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn5O54942 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cldn5O54942 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.18■□□□□ 0.98
Cldn5O54942 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn5O54942 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn5O54942 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn5O54942 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn5O54942 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cldn5O54942 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Cldn5O54942 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn5O54942 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn5O54942 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn5O54942 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn5O54942 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cldn5O54942 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn5O54942 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn5O54942 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn5O54942 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn5O54942 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn5O54942 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.16■□□□□ 0.98
Cldn5O54942 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn5O54942 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cldn5O54942 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cldn5O54942 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn5O54942 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn5O54942 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Cldn5O54942 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn5O54942 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.15■□□□□ 0.98
Cldn5O54942 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.15■□□□□ 0.98
Cldn5O54942 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn5O54942 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.15■□□□□ 0.98
Cldn5O54942 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn5O54942 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cldn5O54942 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cldn5O54942 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cldn5O54942 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
Cldn5O54942 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cldn5O54942 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cldn5O54942 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.14■□□□□ 0.97
Cldn5O54942 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.14■□□□□ 0.97
Cldn5O54942 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.14■□□□□ 0.97
Cldn5O54942 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn5O54942 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn5O54942 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn5O54942 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cldn5O54942 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cldn5O54942 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn5O54942 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.13■□□□□ 0.97
Cldn5O54942 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn5O54942 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn5O54942 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn5O54942 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn5O54942 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn5O54942 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn5O54942 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cldn5O54942 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn5O54942 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.12■□□□□ 0.97
Cldn5O54942 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.12■□□□□ 0.97
Cldn5O54942 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn5O54942 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn5O54942 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cldn5O54942 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.11■□□□□ 0.97
Cldn5O54942 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn5O54942 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.1■□□□□ 0.97
Cldn5O54942 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn5O54942 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn5O54942 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn5O54942 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.1■□□□□ 0.97
Cldn5O54942 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn5O54942 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn5O54942 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cldn5O54942 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn5O54942 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn5O54942 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cldn5O54942 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.09■□□□□ 0.97
Cldn5O54942 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.09■□□□□ 0.97
Cldn5O54942 Mir7075-201ENSMUST00000184187 82 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms