Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pkd1O08852 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pkd1O08852 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pkd1O08852 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pkd1O08852 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pkd1O08852 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pkd1O08852 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pkd1O08852 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pkd1O08852 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.2□□□□□ -0.3
Pkd1O08852 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pkd1O08852 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.2□□□□□ -0.3
Pkd1O08852 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pkd1O08852 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.2□□□□□ -0.3
Pkd1O08852 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pkd1O08852 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.19□□□□□ -0.3
Pkd1O08852 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.19□□□□□ -0.3
Pkd1O08852 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pkd1O08852 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pkd1O08852 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pkd1O08852 Gm13148-201ENSMUST00000118892 745 ntBASIC13.19□□□□□ -0.3
Pkd1O08852 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.19□□□□□ -0.3
Pkd1O08852 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pkd1O08852 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pkd1O08852 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Pkd1O08852 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.19□□□□□ -0.3
Pkd1O08852 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pkd1O08852 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd1O08852 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd1O08852 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd1O08852 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.18□□□□□ -0.3
Pkd1O08852 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pkd1O08852 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd1O08852 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.18□□□□□ -0.3
Pkd1O08852 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Pkd1O08852 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd1O08852 Gm12441-201ENSMUST00000121806 588 ntBASIC13.18□□□□□ -0.3
Pkd1O08852 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd1O08852 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd1O08852 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pkd1O08852 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC13.17□□□□□ -0.3
Pkd1O08852 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC13.17□□□□□ -0.3
Pkd1O08852 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd1O08852 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd1O08852 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd1O08852 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd1O08852 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pkd1O08852 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pkd1O08852 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd1O08852 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pkd1O08852 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pkd1O08852 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd1O08852 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.16□□□□□ -0.3
Pkd1O08852 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pkd1O08852 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd1O08852 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd1O08852 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.16□□□□□ -0.3
Pkd1O08852 H3f3aos-201ENSMUST00000097448 2905 ntBASIC13.16□□□□□ -0.3
Pkd1O08852 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pkd1O08852 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd1O08852 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd1O08852 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd1O08852 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 AC115037.1-201ENSMUST00000223391 2173 ntBASIC13.15□□□□□ -0.3
Pkd1O08852 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 Mir7071-201ENSMUST00000184847 69 ntBASIC13.15□□□□□ -0.3
Pkd1O08852 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pkd1O08852 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pkd1O08852 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.14□□□□□ -0.31
Pkd1O08852 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.14□□□□□ -0.31
Pkd1O08852 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pkd1O08852 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.14□□□□□ -0.31
Pkd1O08852 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pkd1O08852 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pkd1O08852 Gm11421-201ENSMUST00000122124 294 ntBASIC13.13□□□□□ -0.31
Pkd1O08852 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.13□□□□□ -0.31
Pkd1O08852 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.13□□□□□ -0.31
Pkd1O08852 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC13.13□□□□□ -0.31
Pkd1O08852 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pkd1O08852 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pkd1O08852 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pkd1O08852 Reep4-203ENSMUST00000226563 1444 ntBASIC13.13□□□□□ -0.31
Pkd1O08852 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pkd1O08852 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pkd1O08852 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pkd1O08852 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms