Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trove2O08848 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trove2O08848 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trove2O08848 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trove2O08848 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trove2O08848 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Trove2O08848 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.69■□□□□ 0.9
Trove2O08848 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.69■□□□□ 0.9
Trove2O08848 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trove2O08848 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trove2O08848 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trove2O08848 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trove2O08848 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trove2O08848 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Trove2O08848 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trove2O08848 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trove2O08848 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trove2O08848 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.67■□□□□ 0.9
Trove2O08848 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.67■□□□□ 0.9
Trove2O08848 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.67■□□□□ 0.9
Trove2O08848 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trove2O08848 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trove2O08848 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trove2O08848 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.67■□□□□ 0.9
Trove2O08848 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trove2O08848 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trove2O08848 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trove2O08848 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trove2O08848 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trove2O08848 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trove2O08848 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.66■□□□□ 0.9
Trove2O08848 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trove2O08848 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trove2O08848 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trove2O08848 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trove2O08848 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trove2O08848 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trove2O08848 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.65■□□□□ 0.9
Trove2O08848 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trove2O08848 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trove2O08848 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.65■□□□□ 0.9
Trove2O08848 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trove2O08848 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trove2O08848 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.64■□□□□ 0.89
Trove2O08848 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trove2O08848 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trove2O08848 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trove2O08848 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trove2O08848 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trove2O08848 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trove2O08848 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trove2O08848 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trove2O08848 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trove2O08848 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trove2O08848 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.63■□□□□ 0.89
Trove2O08848 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trove2O08848 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
Trove2O08848 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Trove2O08848 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trove2O08848 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trove2O08848 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trove2O08848 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trove2O08848 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trove2O08848 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trove2O08848 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trove2O08848 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trove2O08848 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Trove2O08848 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trove2O08848 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trove2O08848 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.61■□□□□ 0.89
Trove2O08848 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trove2O08848 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.6■□□□□ 0.89
Trove2O08848 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trove2O08848 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Trove2O08848 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trove2O08848 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trove2O08848 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms